Development of necroptosis-related gene signature to predict the prognosis of colon adenocarcinoma

被引:0
|
作者
Li, Miaomiao [1 ]
Zhang, Tianyang [1 ]
Chen, Wei [1 ,2 ]
机构
[1] North China Univ Sci & Technol, Sch Life Sci, Tangshan, Peoples R China
[2] Chengdu Univ Tradit Chinese Med, Innovat Inst Chinese Med & Pharm, Chengdu, Peoples R China
关键词
colon adenocarcinoma; necroptosis; gene signature; survival analysis; nomogram; molecular docking; KINASE;
D O I
10.3389/fgene.2022.1051800
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Colon adenocarcinoma (COAD) is a common malignancy and has a high mortality rate. However, the current tumor node metastasis (TNM) staging system is inadequate for prognostic assessment of COAD patients. Therefore, there is an urgent need to identify reliable biomarkers for the prognosis COAD patients. The aberrant expression of necroptosis-related genes (NRGs) is reported to be associated with tumorigenesis and metastasis. In the present work, we compared the expression profiles of NRGs between COAD patients and normal individuals. Based on seven differentially expressed NRGs, a risk score was defined to predict the prognosis of COAD patients. The validation results from both training and independent external cohorts demonstrated that the risk score is able to distinguish the high and low risk COAD patients with higher accuracies, and is independent of the other clinical factors. To facilitate its clinical use, by integrating the proposed risk score, a nomogram was built to predict the risk of individual COAD patients. The C-index of the nomogram is 0.75, indicating the reliability of the nomogram in predicting survival rates. Furthermore, two candidate drugs, namely dapsone and xanthohumol, were screed out and validated by molecular docking, which hold the potential for the treatment of COAD. These results will provide novel clues for the diagnosis and treatment of COAD.
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页数:14
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