Clinical utility of polygenic risk scores for coronary artery disease

被引:84
作者
Klarin, Derek [1 ,2 ,3 ]
Natarajan, Pradeep [3 ,4 ,5 ]
机构
[1] VA Palo Alto Healthcare Syst, Palo Alto, CA USA
[2] Stanford Univ, Sch Med, Div Vasc Surg, Palo Alto, CA 94304 USA
[3] Broad Inst MIT & Harvard, Program Med & Populat Genet & Cardiovasc Dis Init, Cambridge, MA 02142 USA
[4] Harvard Med Sch, Dept Med, Boston, MA 02115 USA
[5] Massachusetts Gen Hosp, Cardiovasc Res Ctr, Boston, MA 02114 USA
关键词
LIFE-STYLE MODIFICATION; HEART-DISEASE; GENETIC RISK; FAMILIAL HYPERCHOLESTEROLEMIA; CARDIOVASCULAR-DISEASE; GENOMEWIDE ASSOCIATION; DIABETES PREVENTION; PREDICTIVE ACCURACY; COST-EFFECTIVENESS; STATIN THERAPY;
D O I
10.1038/s41569-021-00638-w
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Over the past decade, substantial progress has been made in the discovery of alleles contributing to the risk of coronary artery disease. In addition to providing causal insights into disease, these endeavours have yielded and enabled the refinement of polygenic risk scores. These scores can be used to predict incident coronary artery disease in multiple cohorts and indicate the clinical response to some preventive therapies in post hoc analyses of clinical trials. These observations and the widespread ability to calculate polygenic risk scores from direct-to-consumer and health-care-associated biobanks have raised many questions about responsible clinical adoption. In this Review, we describe technical and downstream considerations for the derivation and validation of polygenic risk scores and current evidence for their efficacy and safety. We discuss the implementation of these scores in clinical medicine for uses including risk prediction and screening algorithms for coronary artery disease, prioritization of patient subgroups that are likely to derive benefit from treatment, and efficient prospective clinical trial designs.
引用
收藏
页码:291 / 301
页数:11
相关论文
共 129 条
[1]   Genomic risk prediction of complex human disease and its clinical application [J].
Abraham, Gad ;
Inouye, Michael .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2015, 33 :10-16
[2]   Percutaneous coronary intervention in stable angina (ORBITA): a double-blind, randomised controlled trial [J].
Al-Lamee, Rasha ;
Thompson, David ;
Dehbi, Hakim-Moulay ;
Sen, Sayan ;
Tang, Kare ;
Davies, John ;
Keeble, Thomas ;
Mielewczik, Michael ;
Kaprielian, Raffi ;
Malik, Iqbal S. ;
Nijjer, Sukhjinder S. ;
Petraco, Ricardo ;
Cook, Christopher ;
Ahmad, Yousif ;
Howard, James ;
Baker, Christopher ;
Sharp, Andrew ;
Gerber, Robert ;
Talwar, Suneel ;
Assomull, Ravi ;
Mayet, Jamil ;
Wensel, Roland ;
Collier, David ;
Shun-Shin, Matthew ;
Thom, Simon A. ;
Davies, Justin E. ;
Francis, Darrel P. .
LANCET, 2018, 391 (10115) :31-40
[3]   The "All of Us" Research Program [J].
Denny J.C. ;
Rutter J.L. ;
Goldstein D.B. ;
Philippakis A. ;
Smoller J.W. ;
Jenkins G. ;
Dishman E. .
NEW ENGLAND JOURNAL OF MEDICINE, 2019, 381 (07) :668-676
[4]   Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements [J].
Amariuta, Tiffany ;
Ishigaki, Kazuyoshi ;
Sugishita, Hiroki ;
Ohta, Tazro ;
Koido, Masaru ;
Dey, Kushal K. ;
Matsuda, Koichi ;
Murakami, Yoshinori ;
Price, Alkes L. ;
Kawakami, Eiryo ;
Terao, Chikashi ;
Raychaudhuri, Soumya .
NATURE GENETICS, 2020, 52 (12) :1346-1354
[5]  
[Anonymous], 1995, J NEUROL SCI, V129, P76
[6]  
Aragam KG., 2021, DISCOVERY SYSTEMATIC, DOI [10.1101/2021.05.24.21257377, DOI 10.1101/2021.05.24.21257377]
[7]  
Aragam KG, 2020, J AM COLL CARDIOL, V75, P2769, DOI 10.1016/j.jacc.2020.04.027
[8]   Polygenic Scores to Assess Atherosclerotic Cardiovascular Disease Risk Clinical Perspectives and Basic Implications [J].
Aragam, Krishna G. ;
Natarajan, Pradeep .
CIRCULATION RESEARCH, 2020, 126 (09) :1159-1177
[9]  
Arnett DK, 2019, CIRCULATION, V140, pE596, DOI [10.1161/CIR.0000000000000678, 10.1161/CIR.0000000000000677, 10.1016/j.jacc.2019.03.010, 10.1016/j.jacc.2019.03.009]
[10]   Efficacy and safety of cholesterol-lowering treatment: prospective meta-analysis of data from 90,056 participants in 14 randomised trials of statins [J].
Baigent, C ;
Keech, A ;
Kearney, PM ;
Blackwell, L ;
Buck, G ;
Pollicino, C ;
Kirby, A ;
Sourjina, T ;
Peto, R ;
Collins, R ;
Simes, J .
LANCET, 2005, 366 (9493) :1267-1278