Short-time evolution in the adaptive immune system

被引:2
|
作者
Guttenberg, Nicholas [1 ]
Tabei, S. M. Ali [1 ]
Dinner, Aaron R. [1 ]
机构
[1] Univ Chicago, James Franck Inst, Chicago, IL 60637 USA
来源
PHYSICAL REVIEW E | 2011年 / 84卷 / 03期
关键词
AFFINITY MATURATION; OPTIMIZATION; AUTOIMMUNITY;
D O I
10.1103/PhysRevE.84.031932
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
We exploit a simple model to numerically and analytically investigate the effect of enforcing a time constraint for achieving a system-wide goal during an evolutionary dynamics. This situation is relevant to finding antibody specificities in the adaptive immune response as well as to artificial situations in which an evolutionary dynamics is used to generate a desired capability in a limited number of generations. When the likelihood of finding the target phenotype is low, we find that the optimal mutation rate can exceed the error threshold, in contrast to conventional evolutionary dynamics. We also show how a logarithmic correction to the usual inverse scaling of population size with mutation rate arises. Implications for natural and artificial evolutionary situations are discussed.
引用
收藏
页数:11
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