Genome-wide identification and expression analysis of the AAAP family inFragaria vesca

被引:5
|
作者
Liang, Wenwei [1 ,2 ]
Ling, Lei [1 ]
Wang, Mingjie [2 ]
Du, Binghao [1 ]
Duan, Yadong [2 ]
Song, Penghui [2 ]
Zhang, Lili [2 ]
Li, Pengju [2 ]
Ma, Jun [3 ]
Wu, Liren [3 ]
Guo, Changhong [1 ]
机构
[1] Harbin Normal Univ, Coll Life Sci & Technol, Key Lab Mol Cytogenet & Genet Breeding Heilongjia, Harbin 150025, Heilongjiang, Peoples R China
[2] Heilongjiang Acad Agr Sci, Rural Revitalizat Sci & Technol Res Inst, Berry Resources Lab, Harbin, Heilongjiang, Peoples R China
[3] Heilongjiang Acad Agr Sci, Cash Crop Res Inst, Sunflower Lab, Harbin, Heilongjiang, Peoples R China
关键词
Fragaria vesca; AAAP protein; genome-wide; expression analysis; anthracnose; Colletotrichum gloeosporioides; AMINO-ACID TRANSPORTERS; GENE FAMILY; PROTEIN;
D O I
10.1080/13102818.2020.1806107
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The amino acid/auxin permease (AAAP) gene family plays a significant role in the long-distance amino acid transport and is involved in plant stress responses and various developmental processes. The functions of the AAAP family have been extensively discussed in multiple organisms, whereas detailed information of this family in strawberry (Fragaria vesca) has not been reported yet. In this study, we identified 45 AAAP genes in the strawberry genome. Phylogenetic analysis indicated that AAAPs from strawberry andArabidopsiswere clustered into eight groups. Expression analysis of the AAAP family showed that AAAP genes were expressed differentially in different developmental stages of flower and fruit, and were significantly induced afterColletotrichum gloeosporioidesinfection. Our study provides a comprehensive understanding of the strawberry AAAP family and demonstrates their potential roles in disease resistance, providing more reference for further research.
引用
收藏
页码:790 / 799
页数:10
相关论文
共 50 条
  • [1] Genome-wide identification and expression analysis of the AAAP family in Medicago truncatula
    Qu, Yue
    Ling, Lei
    Wang, Dan
    Zhang, Tong
    Guo, Changhong
    GENETICA, 2019, 147 (02) : 185 - 196
  • [2] Genome-wide identification and expression analysis of the AAAP family in Medicago truncatula
    Yue Qu
    Lei Ling
    Dan Wang
    Tong Zhang
    Changhong Guo
    Genetica, 2019, 147 : 185 - 196
  • [3] Genome-Wide Identification and Expression Analysis of AAAP Gene Family in Cerasus humilis During Fruit Development
    Fu, Hongbo
    Wang, Pengfei
    Du, Junjie
    Mu, Xiaopeng
    Yuan, Shengyong
    Yang, Yongchao
    Li, Jie
    PLANT MOLECULAR BIOLOGY REPORTER, 2023, 41 (01) : 92 - 103
  • [4] Genome-wide identification and expression analysis of Aux/IAA gene family in strawberry (Fragaria vesca)
    Su, Liyan
    Yu, Hong
    Zhang, Jiudong
    Zhao, Xiaohong
    Liu, Xuan
    Li, Qiang
    BIOCELL, 2021, 45 (04) : 1153 - 1166
  • [5] Genome-wide identification and expression analysis of the SPL gene family in woodland strawberry Fragaria vesca
    Xiong, Jin-Song
    Zheng, Dan
    Zhu, Hong-Yu
    Chen, Jian-Qiu
    Na, Ran
    Cheng, Zong-Ming
    GENOME, 2018, 61 (09) : 675 - 683
  • [6] Genome-Wide Identification and Expression Analysis of AAAP Gene Family in Cerasus humilis During Fruit Development
    Hongbo Fu
    Pengfei Wang
    Junjie Du
    Xiaopeng Mu
    Shengyong Yuan
    Yongchao Yang
    Jie Li
    Plant Molecular Biology Reporter, 2023, 41 : 92 - 103
  • [7] Genome-wide identification of the AAAP gene family and expression analysis under tissue-specific expression in five legumes
    Chen, Naiyu
    Wang, Shulei
    Yin, Yajie
    Ren, Guoling
    Zhang, Yiting
    Qu, Lina
    Ling, Lei
    BMC GENOMICS, 2025, 26 (01):
  • [8] Genome-wide identification and expression analysis of auxin response factor(ARF) gene family in strawberry(Fragaria vesca)
    WANG Shao-xi
    SHI Feng-yan
    DONG Xiang-xiang
    LI Yu-xiang
    ZHANG Zhi-hong
    LI He
    Journal of Integrative Agriculture, 2019, 18 (07) : 1587 - 1603
  • [9] Genome-wide identification and expression analysis of auxin response factor (ARF) gene family in strawberry (Fragaria vesca)
    Wang Shao-xi
    Shi Feng-yan
    Dong Xiang-xiang
    Li Yu-xiang
    Zhang Zhi-hong
    Li He
    JOURNAL OF INTEGRATIVE AGRICULTURE, 2019, 18 (07) : 1587 - 1603
  • [10] Genome-wide identification and expression analyses of the pectate lyase (PL) gene family in Fragaria vesca
    Xiaolong Huang
    Guilian Sun
    Zongmin Wu
    Yu Jiang
    Qiaohong Li
    Yin Yi
    Huiqing Yan
    BMC Genomics, 24