Genome Sequence compression algorithm based on the Distributed source coding

被引：0
|
作者：
Shao, Jing-Jing [1 ]
机构：
[1] Yunnan Univ, DianChi Coll, Coll Sci & Technol, Kunming 652008, Peoples R China
来源：
PROCEEDINGS OF THE 2016 6TH INTERNATIONAL CONFERENCE ON MACHINERY, MATERIALS, ENVIRONMENT, BIOTECHNOLOGY AND COMPUTER (MMEBC) | 2016年 / 88卷
关键词：
Distributed source coding; Genome sequence compression; Side information; Context weighting; Hilbert spacing filling;
D O I：
暂无
中图分类号：
T [工业技术];
学科分类号：
08 ;
摘要：
The genome sequence compression algorithm based on the distributed source coding technology purely is proposed in this paper. In order to enhance the compression efficiency, the genome sequence is mapped into two binary sources and then they are transmitted into two bilevel images. After initialization, the distributed source coding based on LDPC is constructed for compressing these two sequences. To compress the side information, the optimized context weighting is suggested. The experiments results indicate that the coding efficiency is better than results from any other compression algorithms for microbial genome sequence compression.
引用
收藏
页码：1795 / 1799
页数：5
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