Discovery of Novel Glucose-Regulated Proteins in Isolated Human Pancreatic Islets Using LC-MS/MS-Based Proteomics

被引:48
|
作者
Schrimpe-Rutledge, Alexandra C. [1 ]
Fontes, Ghislaine [2 ]
Gritsenko, Marina A. [1 ]
Norbeck, Angela D. [1 ]
Anderson, David J. [1 ]
Waters, Katrina M. [3 ]
Adkins, Joshua N. [1 ]
Smith, Richard D. [1 ]
Poitout, Vincent [2 ,4 ,5 ,6 ]
Metz, Thomas O. [1 ]
机构
[1] Pacific NW Natl Lab, Div Biol Sci, Richland, WA 99352 USA
[2] CRCHUM, Montreal Diabet Res Ctr, Montreal, PQ, Canada
[3] Pacific NW Natl Lab, Computat Sci & Math Div, Richland, WA 99352 USA
[4] Univ Montreal, Dept Med, Montreal, PQ H3C 3J7, Canada
[5] Univ Montreal, Dept Nutr, Montreal, PQ H3C 3J7, Canada
[6] Univ Montreal, Dept Biochem, Montreal, PQ H3C 3J7, Canada
关键词
human; pancreatic islet; glucose; type; 2; diabetes; proteomics; mass spectrometry; LC-MS/MS; 2-DIMENSIONAL GEL-ELECTROPHORESIS; MAMMALIAN MITOCHONDRIAL RIBOSOME; GENE-EXPRESSION; BETA-CELL; INTERACTING PROTEIN; INSULIN-SECRETION; HUMAN HOMOLOG; RECEPTOR; IDENTIFICATION; ASSOCIATION;
D O I
10.1021/pr3002996
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The prevalence of diabetes mellitus is increasing dramatically throughout the world, and the disease has become a major public health issue. The most common form of the disease, type 2 diabetes, is characterized by insulin resistance and insufficient insulin production from the pancreatic beta-cell. Since glucose is the most potent regulator of beta-cell function under physiological conditions, identification of the insulin secretory defect underlying type 2 diabetes requires a better understanding of glucose regulation of human beta-cell function. To this aim, a bottom-up LC-MS/MS-based proteomics approach was used to profile pooled islets from multiple donors under basal (5 mM) or high (1.5 mM) glucose conditions. Our analysis discovered 256 differentially abundant proteins (similar to p < 0.05) after 24 h of high glucose exposure from more than 4500 identified in total. Several novel glucose-regulated proteins were elevated under high glucose conditions, including regulators of mRNA splicing (pleiotropic regulator 1), processing (retinoblastoma binding protein 6), and function (nuclear RNA export factor 1), in addition to neuron navigator I and plasminogen activator inhibitor 1. Proteins whose abundances markedly decreased during incubation at 15 mM glucose included Bax inhibitor 1 and synaptotagmin-17. Up-regulation of dicer 1 and SLC27A2 and down-regulation of phospholipase C beta 4 were confirmed by Western blots. Many proteins found to be differentially abundant after high glucose stimulation are annotated as uncharacterized or hypothetical. These findings expand our knowledge of glucose regulation of the human islet proteome and suggest many hitherto unknown responses to glucose that require additional studies to explore novel functional roles.
引用
收藏
页码:3520 / 3532
页数:13
相关论文
共 50 条
  • [1] Colorectal cancer biomarker discovery and validation using LC-MS/MS-based proteomics in blood: truth or dare?
    Reumer, Ank
    Maes, Evelyne
    Mertens, Inge
    Cho, William C. S.
    Landuyt, Bart
    Valkenborg, Dirk
    Schoofs, Liliane
    Baggerman, Geert
    EXPERT REVIEW OF PROTEOMICS, 2014, 11 (04) : 449 - 463
  • [2] iTRAQ-and LC-MS/MS-based quantitative proteomics reveals potential novel regulators of hepatic glucose metabolism
    ZHANG Wen-jie
    SUN Di-yang
    LI Guo-Qiang
    ZENG Fei-yan
    FU Jiang-tao
    TONG Jie
    MIAO Chao-yu
    LI Dong-Jie
    WANG Pei
    中国药理学与毒理学杂志, 2019, (10) : 928 - 928
  • [3] The Optimized Workflow for Sample Preparation in LC-MS/MS-Based Urine Proteomics
    Saito, Suguru
    Hirao, Yoshitoshi
    Quadery, Ali F.
    Xu, Bo
    Elguoshy, Amr
    Fujinaka, Hidehiko
    Koma, Shohei
    Yamamoto, Keiko
    Yamamoto, Tadashi
    METHODS AND PROTOCOLS, 2019, 2 (02) : 1 - 13
  • [4] LC-MS/MS-based quantification of efflux transporter proteins at the BBB
    Gomez-Zepeda, David
    Taghi, Meryam
    Smirnova, Maria
    Sergent, Philippe
    Liu, Wang-Qing
    Chhuon, Cerina
    Vidal, Michel
    Picard, Martin
    Thioulouse, Elizabeth
    Broutin, Isabelle
    Guerrera, Ida-Chiara
    Scherrmann, Jean-Michel
    Parmentier, Yannick
    Decleves, Xavier
    Menet, Marie-Claude
    JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS, 2019, 164 : 496 - 508
  • [5] LC-MS/MS-based serum proteomics for identification of candidate biomarkers for hepatocellular carcinoma
    Tsai, Tsung-Heng
    Song, Ehwang
    Zhu, Rui
    Di Poto, Cristina
    Wang, Minkun
    Luo, Yue
    Varghese, Rency S.
    Tadesse, Mahlet G.
    Ziada, Dina Hazem
    Desai, Chirag S.
    Shetty, Kirti
    Mechref, Yehia
    Ressom, Habtom W.
    PROTEOMICS, 2015, 15 (13) : 2369 - 2381
  • [6] LC-MS/MS-based shotgun proteomics identified the targets of arthritis-related microRNA
    Kurata, Riho
    Yonezawa, Tomo
    Nakajima, Hideki
    Takada, Shyuji
    Asahara, Hiroshi
    ARTHRITIS RESEARCH & THERAPY, 2012, 14
  • [7] Controlling nonspecific trypsin cleavages in LC-MS/MS-based shotgun proteomics using optimized experimental conditions
    Fang, Pan
    Liu, Mingqi
    Xue, Yu
    Yao, Jun
    Zhang, Yang
    Shen, Huali
    Yang, Pengyuan
    ANALYST, 2015, 140 (22) : 7613 - 7621
  • [8] Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum
    Saul Chemonges
    Rajesh Gupta
    Paul C. Mills
    Steven R. Kopp
    Pawel Sadowski
    Proteome Science, 15
  • [9] Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum
    Chemonges, Saul
    Gupta, Rajesh
    Mills, Paul C.
    Kopp, Steven R.
    Sadowski, Pawel
    PROTEOME SCIENCE, 2017, 15
  • [10] LC-MS/MS-based shotgun proteomics identified the targets of arthritis-related microRNA
    Riho Kurata
    Tomo Yonezawa
    Hideki Nakajima
    Shyuji Takada
    Hiroshi Asahara
    Arthritis Research & Therapy, 14 (Suppl 1):