Relationship between Hydrophobic Interactions and Secondary Structure Stability for Trpzip β-Hairpin Peptides

被引:49
|
作者
Takekiyo, Takahiro [1 ,2 ]
Wu, Ling [1 ]
Yoshimura, Yukihiro [2 ]
Shimizu, Akio [3 ]
Keiderling, Timothy A. [1 ]
机构
[1] Univ Illinois, Dept Chem, Chicago, IL 60607 USA
[2] Natl Def Acad, Dept Appl Chem, Kanagawa 2398686, Japan
[3] Soka Univ, Dept Environm Engn Symbiosis Factory Engn, Tokyo 1928577, Japan
基金
美国国家科学基金会;
关键词
TRANSFORM INFRARED-SPECTROSCOPY; AQUEOUS-SOLUTION; IR SPECTROSCOPY; SIDE-CHAINS; THERMODYNAMIC ANALYSIS; AROMATIC INTERACTION; ALANINE PEPTIDE; RAMAN-SPECTRA; MODEL SYSTEMS; ALPHA-HELIX;
D O I
10.1021/bi8019838
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The temperature-induced beta-hairpin stabilities of selected mutations of the Trpzip1 peptide, SWTWEGNKWTWK (WWWW), have been investigated by electronic circular dichroism (CD), Raman, and FT-IR spectroscopies. The tryptophan (Trp) residues in the original Trpzip1 sequence were systematically substituted with tyrosine (Tyr) in different positions to test the impact of Trp interactions on the beta-hairpin structure and stability. The CD intensity at similar to 228 nm, which arises from Trp-Trp interactions (tertiary structure), and the amide I' IR absorbance at similar to 1635 cm(-1) (secondary structure) have been measured over a range of temperatures to investigate the impact of Tyr substitution on P-hairpin thermal stability in Trpzip peptides. Mutation from Trp to Tyr in the Trpzip1 sequence reduces the extent of beta-hairpin structure and monotonically decreases the beta-hairpin stability of Trpzip1 mutant peptides with an increasing number of Tyr substitutions. Substituted Trpzip peptides with just one pair of Trp-Trp interactions close to either the terminal residues (WYYW) or the turn (YWWY) have similar stabilities. Comparison of conformational transitions monitored by CD and IR reveals them to have multistate behavior in which the temperature-induced disruption of the Trp-Trp interaction (tertiary structure) occurs at a lower temperature than the unfolding of the secondary structure.
引用
收藏
页码:1543 / 1552
页数:10
相关论文
共 50 条
  • [1] Role of Tryptophan-Tryptophan Interactions in Trpzip β-Hairpin Formation, Structure, and Stability
    Wu, Ling
    McElheny, Dan
    Huang, Rong
    Keiderling, Timothy A.
    BIOCHEMISTRY, 2009, 48 (43) : 10362 - 10371
  • [2] Vibrational spectral simulation for peptides of mixed secondary structure: Method comparisons with the TrpZip model hairpin
    Bour, P
    Keiderling, TA
    JOURNAL OF PHYSICAL CHEMISTRY B, 2005, 109 (49): : 23687 - 23697
  • [3] Time-resolved temperature-jump infrared spectroscopy of peptides with well-defined secondary structure:: A Trpzip β-hairpin variant as an example
    Krejtschi, Carsten
    Huang, Rong
    Keiderling, Timothy A.
    Hauser, Karin
    VIBRATIONAL SPECTROSCOPY, 2008, 48 (01) : 1 - 7
  • [4] Hydrophobic interactions in the formation of secondary structures in small peptides
    Dias, Cristiano L.
    Karttunen, Mikko
    Chan, Hue Sun
    PHYSICAL REVIEW E, 2011, 84 (04):
  • [5] Structure-activity relationship study of ß-hairpin peptides
    Rathessan, Aparna Palakkurussi
    Chowdhary, Suvrat
    Kupke, Johannes
    Fulde, Marcus
    Koksch, Beate
    JOURNAL OF PEPTIDE SCIENCE, 2024, 30
  • [6] Communication: Relationship between local structure and the stability of water in hydrophobic confinement
    Altabet, Y. Elia
    Debenedetti, Pablo G.
    JOURNAL OF CHEMICAL PHYSICS, 2017, 147 (24):
  • [7] STABILITY OF PROTEIN-STRUCTURE AND HYDROPHOBIC INTERACTIONS
    PRIVALOV, PL
    BIOLOGICAL CHEMISTRY HOPPE-SEYLER, 1988, 369 (04): : 199 - 199
  • [8] Hairpin structure stability plays a role in the activity of two antimicrobial peptides
    Sivanesam, Kalkena
    Kier, Brandon L.
    Whedon, Samuel D.
    Chatterjee, Champak
    Andersen, Niels H.
    FEBS LETTERS, 2016, 590 (24) : 4480 - 4488
  • [9] Comparison of C-H•••π and hydrophobic interactions in a β-hairpin peptide:: Impact on stability and specificity
    Tatko, CD
    Waters, ML
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (07) : 2028 - 2034
  • [10] Metallophilic interactions and structure-stability relationship with secondary interactions in [ZnX]- based hybrid derivatives
    Singh, Bikram
    Thakur, Atul
    Kumar, Mukesh
    Jasrotia, Dinesh
    MATERIALS CHEMISTRY AND PHYSICS, 2017, 196 : 52 - 61