A universal fixation method based on quaternary ammonium salts (RNAlater) for omics-technologies: Saccharomyces cerevisiae as a case study

被引:16
|
作者
van Eijsden, Rudy G. E. [1 ]
Stassen, Catherine [2 ]
Daenen, Luk [3 ]
Van Mulders, Sebastiaan E. [3 ]
Bapat, Prashant M. [4 ]
Siewers, Verena [5 ]
Goossens, Katty V. Y. [6 ]
Nielsen, Jens [5 ]
Delvaux, Freddy R. [3 ]
Van Hummelen, Paul [7 ]
Devreese, Bart [2 ]
Willaert, Ronnie G. [6 ]
机构
[1] VIB, VIB Nucle Core, Louvain, Belgium
[2] Univ Ghent, Dept Biochem & Microbiol, Lab Prot Biochem & Biomol Engn, B-9000 Ghent, Belgium
[3] Katholieke Univ Leuven, Ctr Malting & Brewing Sci, Dept Microbial & Mol Syst, Louvain, Belgium
[4] Tech Univ Denmark, Ctr Microbial Biotechnol, Dept Syst Biol, DK-2800 Lyngby, Denmark
[5] Chalmers Univ Technol, Dept Chem & Biol Engn, S-41296 Gothenburg, Sweden
[6] Vrije Univ Brussel, Dept Bioengn Sci, Res Grp Struct Biol, B-1050 Brussels, Belgium
[7] Dana Farber Canc Inst, Dept Med Oncol, Boston, MA 02115 USA
关键词
Fluxomics; Genomics; Omics; RNAlater; Saccharomyces cerevisiae; Transcriptomics; MESSENGER-RNA; STORAGE; PRESERVATION; METABOLISM; NUMBER; FROZEN; YEAST; PCR; DNA;
D O I
10.1007/s10529-013-1163-0
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Genomics, transcriptomics, proteomics and fluxomics are powerful omics-technologies that play a major role in today's research. For each of these techniques good sample quality is crucial. Major factors contributing to the quality of a sample is the actual sampling procedure itself and the way the sample is stored directly after sampling. It has already been described that RNAlater can be used to store tissues and cells in a way that the RNA quality and quantity are preserved. In this paper, we demonstrate that quaternary ammonium salts (RNAlater) are also suitable to preserve and store samples from Saccharomyces cerevisiae for later use with the four major omics-technologies. Moreover, it is shown that RNAlater also preserves the cell morphology and the potential to recover growth, permitting microscopic analysis and yeast cell culturing at a later stage.
引用
收藏
页码:891 / 900
页数:10
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  • [1] A universal fixation method based on quaternary ammonium salts (RNAlater) for omics-technologies: Saccharomyces cerevisiae as a case study
    Rudy G. E. van Eijsden
    Catherine Stassen
    Luk Daenen
    Sebastiaan E. Van Mulders
    Prashant M. Bapat
    Verena Siewers
    Katty V. Y. Goossens
    Jens Nielsen
    Freddy R. Delvaux
    Paul Van Hummelen
    Bart Devreese
    Ronnie G. Willaert
    Biotechnology Letters, 2013, 35 : 891 - 900