Single polymer dynamics under large amplitude oscillatory extension

被引:29
|
作者
Zhou, Yuecheng [1 ]
Schroeder, Charles M. [1 ,2 ,3 ]
机构
[1] Univ Illinois, Dept Mat Sci & Engn, Urbana, IL 61801 USA
[2] Univ Illinois, Dept Chem & Biomol Engn, Urbana, IL 61801 USA
[3] Univ Illinois, Ctr Biophys & Quantitat Biol, Urbana, IL 61801 USA
来源
PHYSICAL REVIEW FLUIDS | 2016年 / 1卷 / 05期
基金
美国国家科学基金会;
关键词
HYDRODYNAMIC INTERACTION; BROWNIAN DYNAMICS; DNA; SHEAR; DILUTE; FLOW; SIMULATIONS; FLUCTUATIONS; RELAXATION; MOLECULES;
D O I
10.1103/PhysRevFluids.1.053301
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
Understanding the conformational dynamics of polymers in time-dependent flows is of key importance for controlling materials properties during processing. Despite this importance, however, it has been challenging to study polymer dynamics in controlled time-dependent or oscillatory extensional flows. In this work, we study the dynamics of single polymers in large-amplitude oscillatory extension (LAOE) using a combination of experiments and Brownian dynamics (BD) simulations. Two-dimensional LAOE flow is generated using a feedback-controlled stagnation point device known as the Stokes trap, thereby generating an oscillatory planar extensional flow with alternating principal axes of extension and compression. Our results show that polymers experience periodic cycles of compression, reorientation, and extension in LAOE, and dynamics are generally governed by a dimensionless flow strength (Weissenberg number Wi) and dimensionless frequency (Deborah number De). Single molecule experiments are compared to BD simulations with and without intramolecular hydrodynamic interactions (HI) and excluded volume (EV) interactions, and good agreement is obtained across a range of parameters. Moreover, transient bulk stress in LAOE is determined from simulations using the Kramers relation, which reveals interesting and unique rheological signatures for this time-dependent flow. We further construct a series of single polymer stretch-flow rate curves (defined as single molecule Lissajous curves) as a function of Wi and De, and we observe qualitatively different dynamic signatures (butterfly, bow tie, arch, and line shapes) across the twodimensional Pipkin space defined byWi and De. Finally, polymer dynamics spanning from the linear to nonlinear response regimes are interpreted in the context of accumulated fluid strain in LAOE.
引用
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页数:17
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