Analysis of genetic diversity and phylogeny of Philosamia ricini (Lepidoptera: Saturniidae) by using RAPD and internal transcribed spacer DNA1

被引:2
|
作者
Saikia, Mousumi [1 ]
Devi, Dipali [1 ]
机构
[1] Inst Adv Study Sci & Technol, Life Sci Div, Gauhati 781035, Assam, India
关键词
Genetic diversity; Molecular markers; Silkworm; Philosamia ricini; Morph; SAMIA-CYNTHIA-RICINI; INDIAN ERI SILKWORM; RIBOSOMAL DNA; POPULATIONS; DIFFERENTIATION; POLYMORPHISM; DIPTERA; RDNA; COMPLEX; VECTOR;
D O I
10.1007/s11033-019-04740-8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Indian Eri silkworm, Philosamia ricini Hutt, a commercial silk producing insect, is believed to have originated in the Brahmaputra valley of Assam. In this study, the genetic diversity and phylogenetic relationships of six morphs of Eri silkworm viz. white plain, white zebra, white spotted, blue plain, blue zebra and blue spotted collected from different geographical locations of North-East India were investigated by using random amplified polymorphic DNA (RAPD) and the first internal transcribed spacer region (ITS1). This study revealed a low genetic diversity among the morphs of Eri silkworm. Twenty-eight random primers generated 199 bands. Out of these, 112 were polymorphic (56.28%) with an average of 7.1 bands per primer. The genetic similarity matrix ranged from 0.56 to 0.99. The morphs collected from same geographical area shared the same cluster in the dendrogram. The genetic diversity in case of ITS1 sequences (2.19%) was found to be less as compared to RAPD. The ITS1 sequences of the morphs collected from same geographical area were found to be identical. The information generated in this study will help in conservation and effective breeding program to improve its productivity.
引用
收藏
页码:3035 / 3048
页数:14
相关论文
共 50 条
  • [1] Analysis of genetic diversity and phylogeny of Philosamia ricini (Lepidoptera: Saturniidae) by using RAPD and internal transcribed spacer DNA1
    Mousumi Saikia
    Dipali Devi
    Molecular Biology Reports, 2019, 46 : 3035 - 3048
  • [2] Genetic diversity among the morphs of Antheraea assamensis Helfer: Study using RAPD and internal transcribed spacer DNA1
    Saikia, Mousumi
    Haloi, Kishor
    Nath, Ramesh
    Devi, Dipali
    INDIAN JOURNAL OF EXPERIMENTAL BIOLOGY, 2019, 57 (06) : 418 - 426
  • [3] Genetic variation in ecoraces of eri silkworm Philosamia ricini (Lepidoptera: Saturniidae) using RAPD technique
    Pragyan, Ray Priti
    Rao, T. V.
    RESEARCH JOURNAL OF BIOTECHNOLOGY, 2012, 7 (04): : 217 - 222
  • [4] Molecular phylogeny of silk producing insects based on internal transcribed Spacer DNA1
    Mahendran, Botlagunta
    Ghosh, Sudip K.
    Kundu, Subhas C.
    JOURNAL OF BIOCHEMISTRY AND MOLECULAR BIOLOGY, 2006, 39 (05): : 522 - 529
  • [5] Assessment of Genetic Diversity in Trigonella foenum-graecum Based on Nuclear Ribosomal DNA, Internal Transcribed Spacer and RAPD Analysis
    R. K. Kakani
    S. K. Singh
    Anjly Pancholy
    R. S. Meena
    Rakesh Pathak
    Aparna Raturi
    Plant Molecular Biology Reporter, 2011, 29 : 315 - 323
  • [6] Assessment of Genetic Diversity in Trigonella foenum-graecum Based on Nuclear Ribosomal DNA, Internal Transcribed Spacer and RAPD Analysis
    Kakani, R. K.
    Singh, S. K.
    Pancholy, Anjly
    Meena, R. S.
    Pathak, Rakesh
    Raturi, Aparna
    PLANT MOLECULAR BIOLOGY REPORTER, 2011, 29 (02) : 315 - 323
  • [7] Genetic diversity and phylogeny analysis of Antheraea assamensis Helfer (Lepidoptera: Saturniidae) based on mitochondrial DNA sequences
    Mousumi Saikia
    Ramesh Nath
    Dipali Devi
    Journal of Genetics, 2019, 98
  • [8] Genetic Diversity in Punica granatum Revealed by Nuclear rRNA, Internal Transcribed Spacer and RAPD Polymorphism
    Singh, S. K.
    Meghwal, P. R.
    Pathak, Rakesh
    Gautam, Ragini
    Kumar, Suresh
    NATIONAL ACADEMY SCIENCE LETTERS-INDIA, 2013, 36 (02): : 115 - 124
  • [9] Genetic Diversity in Punica granatum Revealed by Nuclear rRNA, Internal Transcribed Spacer and RAPD Polymorphism
    S. K. Singh
    P. R. Meghwal
    Rakesh Pathak
    Ragini Gautam
    Suresh Kumar
    National Academy Science Letters, 2013, 36 : 115 - 124
  • [10] Genetic diversity and phylogeny analysis of <bold>Antheraea assamensis</bold> Helfer (Lepidoptera: Saturniidae) based on mitochondrial DNA sequences
    Saikia, Mousumi
    Nath, Ramesh
    Devi, Dipali
    JOURNAL OF GENETICS, 2019, 98 (01)