Generalized simulated annealing algorithms using Tsallis statistics: Application to conformational optimization of a tetrapeptide

被引:147
作者
Andricioaei, I
Straub, JE
机构
[1] Department of Chemistry, Boston University, Boston, MA
关键词
D O I
10.1103/PhysRevE.53.R3055
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
A Monte Carlo simulated annealing algorithm based on the generalized entropy of Tsallis is presented. The algorithm obeys detailed balance and reduces to a steepest descent algorithm at low temperatures. Application to the conformational optimization of a tetrapeptide demonstrates that the algorithm is more effective in locating low energy minima than standard simulated annealing based on molecular dynamics or Monte Carlo methods.
引用
收藏
页码:R3055 / R3058
页数:4
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