Dataset of GWAS-identified variants underlying venous thromboembolism susceptibility and linkage to cancer aggressiveness

被引:8
|
作者
Tavares, Valeria [1 ,2 ]
Pinto, Ricardo [1 ]
Assis, Joana [1 ,3 ]
Pereira, Deolinda [1 ,4 ]
Medeiros, Rui [1 ,2 ,3 ,5 ]
机构
[1] Portuguese Inst Oncol, Res Ctr, Mol Oncol & Viral Pathol Grp, Edificio Labs,1 Piso, P-4200072 Porto, Portugal
[2] Abel Salazar Inst Biomed Sci, ICBAS, Rua Jorge Viterbo Ferreira 228, P-4050313 Porto, Portugal
[3] Univ Porto, Fac Med, FMUP, Porto, Portugal
[4] Portuguese Inst Oncol, Oncol Dept, P-4200072 Porto, Portugal
[5] Fernando Pessoa Univ, Fac Hlth Sci, CEBIMED, P-4200150 Porto, Portugal
来源
DATA IN BRIEF | 2020年 / 30卷
关键词
Venous thromboembolism; GWAS; SNPs; Validation reports; Cancer hallmarks; GENETIC-VARIATION; RISK-FACTORS; PROTEIN-S; THROMBOSIS; CELLS; COAGULATION; APOPTOSIS; MARKERS; BETA;
D O I
10.1016/j.dib.2020.105399
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Venous thromboembolism (VTE) is a common cardiovascular disease, for which several single nucleotide polymorphisms (SNPs) underlying susceptibility were identified. Apart from candidate gene approach, genome-wide association studies (GWAS) have contributed to the identification of novel VTE-associated SNPs, including some with no clear role in the haemostatic system. These genetic variants constitute potential cancer-related biomarkers, particularly predictive and prognostic biomarkers, as a two-way association between VTE and cancer is well established. The present dataset comprises the data obtained from GWAS performed to identify genetic variants associated with VTE risk. Furthermore, this dataset also comprises data regarding previously reported candidate gene and validation reports performed in adults of European ancestry that also analysed the VTE GWASi-dentified variants. Lastly, to evaluate the impact of these genetic variants in carcinogenesis, a broad search was made, which has let us to establish putative links between several VTE-associated genes and cancer hallmarks in a review article entitled "Venous thromboembolism GWAS reported genetic makeup and the hallmarks of cancer: linkage to ovarian tumour behaviour". (C) 2020 The Authors. Published by Elsevier Inc.
引用
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页数:17
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