Integrated microRNA-mRNA analysis of pancreatic ductal adenocarcinoma

被引:16
|
作者
Liu, P. F. [1 ]
Jiang, W. H. [2 ]
Han, Y. T. [3 ]
He, L. F. [4 ]
Zhang, H. L. [1 ]
Ren, H. [5 ]
机构
[1] Tianjin Med Univ Canc Inst & Hosp, Natl Clin Res Ctr Canc, Key Lab Canc Prevent & Therapy, Dept Lymphoma,Sino US Ctr Lymphoma & Leukemia, Tianjin, Peoples R China
[2] Tianjin Med Univ, Hosp 2, Dept Radiotherapy, Tianjin, Peoples R China
[3] Tianjin Med Univ, Sch Basic Med Sci, Dept Cell Biol, Tianjin, Peoples R China
[4] Shanxi Agr Univ, Shanxi, Peoples R China
[5] Tianjin Med Univ Canc Inst & Hosp, Natl Clin Res Ctr Canc, Dept Pancreat Canc, Key Lab Canc Prevent & Therapy, Tianjin, Peoples R China
来源
GENETICS AND MOLECULAR RESEARCH | 2015年 / 14卷 / 03期
基金
中国国家自然科学基金;
关键词
Pancreatic adenocarcinoma; MicroRNA; Differentially expressed gene; CANCER; EXPRESSION; EFNB2; PROGRESSION; MIR-200; CELLS; EPHB6;
D O I
10.4238/2015.August.28.14
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The main aim of this study was to explore the underlying molecular mechanisms and potential target molecules of pancreatic adenocarcinoma. The miRNA (GSE32678) and mRNA (GSE32676) expression profiles of patients with pancreatic ductal adenocarcinoma and healthy controls were downloaded from the Gene Expression Omnibus database. Differentially expressed miRNA and differentially expressed genes were identified by analyzing the microarray algorithm after data preprocessing. Functional analysis was conducted by the Database for Annotation, Visualization and Integrated Analysis. miRNA-mRNA regulation pairs were obtained in TarMir database. The node degree of hsa-miR-200c, hsa-miR-429, and hsa-miR-200b (miRNA), and EFNB2, MYRIP, and PHF17 (mRNA) were extremely high in the miRNA-mRNA network, indicating that these miRNA and mRNA may play a key role in the development of pancreatic cancer. Our study screened out some target miRNAs and mRNAs for pancreatic ductal adenocarcinoma, which may be helpful in its diagnosis and treatment.
引用
收藏
页码:10288 / 10297
页数:10
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