Electrostatic interactions across a beta-sheet

被引:60
作者
Blasie, CA
Berg, JM
机构
[1] JOHNS HOPKINS UNIV, SCH MED, DEPT BIOPHYS & BIOPHYS CHEM, BALTIMORE, MD 21205 USA
[2] JOHNS HOPKINS UNIV, DEPT CHEM, BALTIMORE, MD 21218 USA
关键词
D O I
10.1021/bi962805i
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The free energy consequences of electrostatic interactions across a model P-sheet have been probed using a consensus zinc finger peptide, Relative folding free energies have been deduced from coupled peptide folding/metal binding reactions. The energies of the electrostatic interactions have been isolated via double mutant cycles performed at a series of NaCl concentrations. The observed favorable free energies associated with potential ion pairs are modest, less than 0.5 kcal/mol. Unfavorable interactions due to like-charge pairs of similar magnitude were also observed. The largest effects, both favorable and unfavorable, involved interactions with aspartic acid, These observations are consistent with electrostatic interactions occurring without contact ion pair formation with the larger interaction energies involving aspartic acid being due to the relative lack of flexibility of its side chain.
引用
收藏
页码:6218 / 6222
页数:5
相关论文
共 18 条
[1]   CONTRIBUTIONS OF ENGINEERED SURFACE SALT BRIDGES TO THE STABILITY OF T4 LYSOZYME DETERMINED BY DIRECTED MUTAGENESIS [J].
DAOPIN, S ;
SAUER, U ;
NICHOLSON, H ;
MATTHEWS, BW .
BIOCHEMISTRY, 1991, 30 (29) :7142-7153
[2]   METAL-DEPENDENT FOLDING OF A SINGLE ZINC FINGER FROM TRANSCRIPTION FACTOR-IIIA [J].
FRANKEL, AD ;
BERG, JM ;
PABO, CO .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1987, 84 (14) :4841-4845
[3]   STRENGTH AND COOPERATIVITY OF CONTRIBUTIONS OF SURFACE SALT BRIDGES TO PROTEIN STABILITY [J].
HOROVITZ, A ;
SERRANO, L ;
AVRON, B ;
BYCROFT, M ;
FERSHT, AR .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 216 (04) :1031-1044
[4]  
HUYGHUESDESPOINTES BMP, 1993, PROTEIN SCI, V2, P80
[5]   A 2.2 angstrom resolution crystal structure of a designed zinc finger protein bound to DNA [J].
Kim, CA ;
Berg, JM .
NATURE STRUCTURAL BIOLOGY, 1996, 3 (11) :940-945
[6]   THERMODYNAMIC BETA-SHEET PROPENSITIES MEASURED USING A ZINC-FINGER HOST PEPTIDE [J].
KIM, CWA ;
BERG, JM .
NATURE, 1993, 362 (6417) :267-270
[7]   A CONSENSUS ZINC FINGER PEPTIDE - DESIGN, HIGH-AFFINITY METAL-BINDING, A PH-DEPENDENT STRUCTURE, AND A HIS TO CYS SEQUENCE VARIANT [J].
KRIZEK, BA ;
AMANN, BT ;
KILFOIL, VJ ;
MERKLE, DL ;
BERG, JM .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1991, 113 (12) :4518-4523
[8]   LIGAND VARIATION AND METAL-ION BINDING-SPECIFICITY IN ZINC FINGER PEPTIDES [J].
KRIZEK, BA ;
MERKLE, DL ;
BERG, JM .
INORGANIC CHEMISTRY, 1993, 32 (06) :937-940
[9]   MEASUREMENT OF INTERHELICAL ELECTROSTATIC INTERACTIONS IN THE GCN4 LEUCINE-ZIPPER [J].
LUMB, KJ ;
KIM, PS .
SCIENCE, 1995, 268 (5209) :436-439
[10]   ENERGETIC CONTRIBUTION OF SOLVENT-EXPOSED ION-PAIRS TO ALPHA-HELIX STRUCTURE [J].
LYU, PCC ;
GANS, PJ ;
KALLENBACH, NR .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 223 (01) :343-350