Experimental and computational evidence for stabilising parallel, offset π[C(=O)N(H)N=C]...π(phenyl) interactions in acetohydrazide derivatives

被引:1
|
作者
Tan, Sang Loon [1 ]
Cardoso, Laura N. F. [2 ]
de Souza, Marcus V. N. [2 ]
Wardell, Solange M. S., V [3 ]
Wardell, James L. [4 ]
Tiekink, Edward R. T. [1 ]
机构
[1] Sunway Univ, Res Ctr Crystalline Mat, Sch Med & Life Sci, Bandar Sunway 47500, Selangor Darul, Malaysia
[2] FIOCRUZ Fundacao Oswaldo Cruz, Inst Tecnol Farmacos Farmanguinhos, BR-21041250 Rio De Janeiro, Brazil
[3] CHEMSOL, 1 Harcourt Rd, Aberdeen AB15 5NY, Scotland
[4] Univ Aberdeen, Dept Chem, Meston Walk AB24 3UE, Old Aberdeen, Scotland
关键词
AROMATIC-AROMATIC INTERACTIONS; MOLECULAR-ORBITAL METHODS; GAUSSIAN-TYPE BASIS; CENTER-DOT-O; CRYSTAL-STRUCTURE; PI-PI; HYDROGEN-BOND; BASIS-SETS; STACKING INTERACTIONS; FLUOROGENIC DETECTION;
D O I
10.1039/d1ce01492g
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Parallel, offset pi[C(= O)N(H)N = C]...pi(phenyl) interactions are observed in the crystal of (2-thienyl)CH2CON(H)-N.C(H)Ph, along with more conventional non-covalent interactions. All notable interactions were analysed using Hirshfeld surface analysis, NCI plots and QTAIM analysis. The pi[C(= O)N(H)N = C]...pi(phenyl) interactions, whereby the N(H) atom lies over the ring centroid and the N and C atoms on either side of the N(H) atom closely overlay the 1,3-carbon atoms of the phenyl ring, are shown to be attractive. Theory suggests the energy of association provided by the pi[C(= O)N(H)N = C]...pi(phenyl) interaction to the molecular packing to be about 15 kJ mol(-1), a value similar to that provided by similarly oriented benzene and pyridine rings. A survey of related structures in the literature suggests that comparable interactions occur in approximately 5-6% of crystals where they can potentially occur.
引用
收藏
页码:962 / 974
页数:13
相关论文
共 50 条
  • [1] Dissecting C−H∙∙∙π and N−H∙∙∙π Interactions in Two Proteins Using a Combined Experimental and Computational Approach
    Jia Wang
    Lishan Yao
    Scientific Reports, 9
  • [2] C–H...O and C–H...N interactions in RNA structures
    Maria Brandl
    Klaus Lindauer
    Michael Meyer
    Jürgen Sühnel
    Theoretical Chemistry Accounts, 1999, 101 : 103 - 113
  • [3] Weak C-H•••O and C-H•••N interactions in nitropyrazoles
    Foces-Foces, C
    Jagerovic, N
    Elguero, J
    ACTA CRYSTALLOGRAPHICA SECTION C-STRUCTURAL CHEMISTRY, 2000, 56 : 215 - 218
  • [4] C-H...O and C-H...N interactions in RNA structures
    Brandl, M
    Lindauer, K
    Meyer, M
    Sühnel, J
    THEORETICAL CHEMISTRY ACCOUNTS, 1999, 101 (1-3) : 103 - 113
  • [5] Weak C-H. . .O and C-H. . .N interactions in nitropyrazoles
    Foces-Foces, C.
    Jagerovic, N.
    Elguero, J.
    Acta Crystallographica Section C: Crystal Structure Communications, 2000, 56 (02) : 215 - 218
  • [6] How directional are D-H•••phenyl interactions in the solid state (D = C, N, O)?
    Mooibroek, Tiddo J.
    Gamez, Patrick
    CRYSTENGCOMM, 2012, 14 (24): : 8462 - 8467
  • [7] Appraising the relative strengths of C-H• • •O=C and N-H• • •O=C interactions from cis-N-methylacetamide multimers
    Mathieu, Simon
    Trinquier, Georges
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2009, 11 (37) : 8183 - 8190
  • [8] Theoretical evidence for the relevance of n(F) → σ*(C-X) (X = H, C, O, S) stereoelectronic interactions
    Juaristi, Eusebio
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 252
  • [9] Theoretical Evidence for the Relevance of n(F) → σ*(C-X) (X = H, C, O, S) Stereoelectronic Interactions
    Juaristi, Eusebio
    Notario, Rafael
    JOURNAL OF ORGANIC CHEMISTRY, 2016, 81 (03): : 1192 - 1197
  • [10] Dissecting C-H•••π and N-H•••π Interactions in Two Proteins Using a Combined Experimental and Computational Approach
    Wang, Jia
    Yao, Lishan
    SCIENTIFIC REPORTS, 2019, 9 (1)