ESTIMATION OF GENETIC DIVERSITY AMONG LINUM USITATISSIMUM L. GERMPLASM THROUGH MOLECULAR MARKERS

被引:1
|
作者
Hameed, Asma [1 ]
Khan, Rizwan Taj [1 ]
Abbas, Syed Rizwan [2 ]
Begum, Sania [3 ]
机构
[1] Univ Azad Jammu & Kashmir, Dept Bot, Muzaffarabad, Pakistan
[2] Karakorum Int Univ, Dept Biol Sci, Hunza Campus, Gilgit, Pakistan
[3] NARC, Sci Officer, Islamabad, Pakistan
关键词
Linum usitatissimum; Genetic diversity; ISSR; SSR; Markers; FLAX GERMPLASM; IDENTIFICATION; LANDRACES; WHEAT;
D O I
10.30848/PJB2023-1(11)
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
The present study was undertaken to evaluate heritable diversity of 42 linseed (Linum usitatissimum L.,) germplasm, 30 from the Pakistan and 12 from the USA through molecular techniques. The research was performed at the National Institute of Genomics and Biotechnology (NIGAB), NARC Islamabad Pakistan. For this purpose, twenty molecular markers (13 ISSR and 7, SSR) has been chosen for the assessment of diversity amongst forty two linseed genotypes through DNA-PCR based technique. DNA extraction was carried out by using the CTAB method. Out of twenty molecular markers (13 ISSR and 7 SSR), sixteen markers were found to be reproducible while four markers (2 of ISSR and SSR each) were not reproducible. Molecular data was demonstrated by dendrograms generated through UPGMA method based on bivariate data matrix. Highly branched clusters based on genetic associations among genotypes were presented by ISSR markers as compared to SSR markers. The 100 to 400 bp fragments were amplified by the SSR markers profiling while 100-1100bp in ISSR profiling. The most significant and diverse genotypes found through SSR markers were 021750, 021570, 021245, 021425 and 021310 while only 1 most diverse genotype 021570 was found through ISSR markers. Hence the genotypes 020885, 020890 and 020870 are recommended for their further used in breeding programs while mapped markers should be used for gene sequencing of genotype 021570.
引用
收藏
页码:63 / 71
页数:9
相关论文
共 50 条
  • [1] Assessment of genetic diversity and DNA profiling of linseed (Linum usitatissimum subsp usitatissimum L.) germplasm using SSR markers
    Rana, M. K.
    Singh, Sonika
    JOURNAL OF PLANT BIOCHEMISTRY AND BIOTECHNOLOGY, 2017, 26 (03) : 293 - 301
  • [2] Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposon-based markers
    Smykal, P.
    Bacova-Kerteszova, N.
    Kalendar, R.
    Corander, J.
    Schulman, A. H.
    Pavelek, M.
    THEORETICAL AND APPLIED GENETICS, 2011, 122 (07) : 1385 - 1397
  • [3] Genetic diversity of cultivated flax (Linum usitatissimum L.) germplasm assessed by retrotransposon-based markers
    P. Smýkal
    N. Bačová-Kerteszová
    R. Kalendar
    J. Corander
    A. H. Schulman
    M. Pavelek
    Theoretical and Applied Genetics, 2011, 122 : 1385 - 1397
  • [4] Assessment of genetic diversity and DNA profiling of linseed (Linum usitatissimum subsp. usitatissimum L.) germplasm using SSR markers
    M. K. Rana
    Sonika Singh
    Journal of Plant Biochemistry and Biotechnology, 2017, 26 : 293 - 301
  • [5] Genetic diversity of Linum usitatissimum L. pathogens
    Novakovskiy, R.
    Pushkova, E.
    Rozhmina, T.
    Kudryavtseva, L.
    Krasnov, G.
    Dmitriev, A.
    Melnikova, N.
    FEBS OPEN BIO, 2019, 9 : 310 - 310
  • [6] Genetic diversity of CAD genes in Linum usitatissimum L.
    Povkhova, L.
    Pushkova, E.
    Rozhmina, T.
    Krasnov, G.
    Kezimana, P.
    Novakovskiy, R.
    Dmitriev, A.
    Melnikova, N.
    FEBS OPEN BIO, 2019, 9 : 289 - 289
  • [7] Genetic diversity analysis of Linseed (Linum usitatissimum L.) accessions using RAPD Markers
    Nagabhushanam, Beema
    Mir, Mohammad Imran
    Nagaraju, M.
    Sujatha, E.
    Devi, B. Rama
    Kumar, B. Kiran
    EMIRATES JOURNAL OF FOOD AND AGRICULTURE, 2021, 33 (07): : 589 - 599
  • [8] Genetic diversity of flax genotypes (Linum usitatissimum L.) by using agro-morphological properties and molecular markers
    Kocak, Mehmet Zeki
    Kaysim, Mustafa Gueven
    Aydin, Adnan
    Erdinc, Ceknas
    Kulak, Muhittin
    GENETIC RESOURCES AND CROP EVOLUTION, 2023, 70 (08) : 2279 - 2306
  • [9] Genetic diversity of flax genotypes (Linum usitatissimum L.) by using agro-morphological properties and molecular markers
    Mehmet Zeki Kocak
    Mustafa Güven Kaysim
    Adnan Aydın
    Ceknas Erdinc
    Muhittin Kulak
    Genetic Resources and Crop Evolution, 2023, 70 : 2279 - 2306
  • [10] SSR markers developed for genetic mapping in flax (Linum usitatissimum L.)
    Bickel, Cory L.
    Gadani, Sachin
    Lukacs, Marshall
    Cullis, Christopher A.
    RESEARCH AND REPORTS IN BIOLOGY, 2011, 2 : 23 - 29