(Re-)use and (re-)analysis of publicly available metabolomics data

被引:3
|
作者
Witting, Michael [1 ,2 ,3 ]
机构
[1] Helmholtz Zentrum Munchen, Metabol & Prote Core, Neuherberg, Germany
[2] TUM Sch Life Sci, Analyt Food Chem, Freising Weihenstephan, Germany
[3] Helmholtz Zentrum Munchen, Metabol & Prote Core, Ingolstadter Landstr 1, D-85764 Neuherberg, Germany
关键词
bioinformatics; data; databases; metabolomics; processing and analysis; technology; CROSS-SECTION VALUES; MASS; METABOLITES; PREDICTION; REPOSITORY;
D O I
10.1002/pmic.202300032
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Metabolomics, the systematic measurement of small molecules (<1000 Da) in a given biological sample, is a fast-growing field with many different applications. In contrast to transcriptomics and proteomics, sharing of data is not as widespread in metabolomics, though more scientists are sharing their data nowadays. However, to improve data analysis tools and develop new data analytical approaches and to improve metabolite annotation and identification, sharing of reference data is crucial. Here, different possibilities to share (metabolomics) data are reviewed and some recent approaches and applications regarding the (re-)use and (re-)analysis are highlighted.
引用
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页数:8
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