Sorting by prefix block-interchanges

被引:1
|
作者
Labarre, Anthony [1 ]
机构
[1] Univ Gustave Eiffel, CNRS, LIGM UMR 8049, Lab Informat Gaspard Monge,ESIEE Paris,UPEM, F-77454 Marne La Vallee, France
关键词
Permutations; Genome rearrangements; Interconnection network; Sorting; Distance; Prefix block-interchange; 1.375-APPROXIMATION ALGORITHM; PERMUTATIONS; COMPLEXITY;
D O I
10.1016/j.tcs.2023.113857
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
We initiate the study of sorting permutations using prefix block-interchanges, which exchange any prefix of a permutation with another non-intersecting interval. The goal is to transform a given permutation into the identity permutation using as few such operations as possible. We give a 2-approximation algorithm for this problem, as well as a 4/3-approximation for simple permutations; we prove tight lower and upper bounds on the corresponding distance; and we bound the largest value that the distance can reach. (c) 2023 Elsevier B.V. All rights reserved.
引用
收藏
页数:16
相关论文
共 50 条
  • [1] Prefix Block-Interchanges on Binary Strings
    Chou, Shih-Wen
    Yang, Chung-Han
    Chen, Kun-Tze
    Lu, Chin Lung
    INTELLIGENT SYSTEMS AND APPLICATIONS (ICS 2014), 2015, 274 : 1960 - 1969
  • [2] Sorting permutations by block-interchanges
    Christie, DA
    INFORMATION PROCESSING LETTERS, 1996, 60 (04) : 165 - 169
  • [3] Sorting permutations by block-interchanges
    Univ of Glasgow, Glasgow, United Kingdom
    Inf Process Lett, 4 (165-169):
  • [4] Sorting by block-interchanges and signed reversals
    Mira, Cleber
    Meidanis, Joao
    INTERNATIONAL CONFERENCE ON INFORMATION TECHNOLOGY, PROCEEDINGS, 2007, : 670 - +
  • [5] Faster algorithms for sorting by transpositions and sorting by block-interchanges
    Feng, Jianxing
    Zhu, Daming
    THEORY AND APPLICATIONS OF MODELS OF COMPUTATION, PROCEEDINGS, 2006, 3959 : 128 - 137
  • [6] Sorting by reversals and block-interchanges with various weight assignments
    Ying Chih Lin
    Chun-Yuan Lin
    Chunhung Richard Lin
    BMC Bioinformatics, 10
  • [7] Approximation algorithms for sorting permutations by extreme block-interchanges
    Pai, Jayakumar
    Chitturi, Bhadrachalam
    THEORETICAL COMPUTER SCIENCE, 2021, 891 : 105 - 115
  • [8] Sorting by reversals and block-interchanges with various weight assignments
    Lin, Ying Chih
    Lin, Chun-Yuan
    Lin, Chunhung Richard
    BMC BIOINFORMATICS, 2009, 10
  • [9] An improved algorithm for sorting by block-interchanges based on permutation groups
    Huang, Yen-Lin
    Huang, Cheng-Chen
    Tang, Chuan Yi
    Lu, Chin Lung
    INFORMATION PROCESSING LETTERS, 2010, 110 (8-9) : 345 - 350