The recent progress of deep-learning-based in silico prediction of drug combination

被引:8
|
作者
Liu, Haoyang [1 ,3 ]
Fan, Zhiguang [1 ,2 ]
Lin, Jie [1 ]
Yang, Yuedong [2 ]
Ran, Ting [1 ]
Chen, Hongming [1 ]
机构
[1] Guangzhou Lab, Dept Drug & Vaccine Res, Guangzhou 513000, Peoples R China
[2] Sun Yat Sen Univ, Sch Comp Sci & Engn, Guangzhou 510000, Peoples R China
[3] Nankai Univ, Coll Life Sci, Tianjin 300071, Peoples R China
关键词
drug combination; drug synergy; machine learning; deep learning; neural network; SYNERGY; RESISTANCE; THERAPY; SCREEN; MODEL;
D O I
10.1016/j.drudis.2023.103625
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Drug combination therapy has become a common strategy for the treatment of complex diseases. There is an urgent need for computational methods to efficiently identify appropriate drug combinations owing to the high cost of experimental screening. In recent years, deep learning has been widely used in the field of drug discovery. Here, we provide a comprehensive review on deep-learning-based drug combination prediction algorithms from multiple aspects. Current studies highlight the flexibility of this technology in integrating multimodal data and the ability to achieve state-of-art performance; it is expected that deep-learning-based prediction of drug combinations should play an important part in future drug discovery.
引用
收藏
页数:11
相关论文
共 50 条
  • [1] Deep-Learning-Based Drug-Target Interaction Prediction
    Wen, Ming
    Zhang, Zhimin
    Niu, Shaoyu
    Sha, Haozhi
    Yang, Ruihan
    Yun, Yonghuan
    Lu, Hongmei
    JOURNAL OF PROTEOME RESEARCH, 2017, 16 (04) : 1401 - 1409
  • [2] Drug-target interaction prediction with a deep-learning-based model
    Xie, Lingwei
    Zhang, Zhongnan
    He, Song
    Bo, Xiaochen
    Song, Xinyu
    2017 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2017, : 469 - 476
  • [3] Recent Progress of Deep Learning in Drug Discovery
    Wang, Feng
    Diao, XiaoMin
    Chang, Shan
    Xu, Lei
    CURRENT PHARMACEUTICAL DESIGN, 2021, 27 (17) : 2088 - 2096
  • [4] Deep-Learning-Based Approach for Prediction of Algal Blooms
    Zhang, Feng
    Wang, Yuanyuan
    Cao, Minjie
    Sun, Xiaoxiao
    Du, Zhenhong
    Liu, Renyi
    Ye, Xinyue
    SUSTAINABILITY, 2016, 8 (10)
  • [5] Deep-learning-based vehicle trajectory prediction: A review
    Yin, Chenhui
    Cecotti, Marco
    Auger, Daniel J.
    Fotouhi, Abbas
    Jiang, Haobin
    IET INTELLIGENT TRANSPORT SYSTEMS, 2025, 19 (01)
  • [6] A Study of Deep-Learning-based Prediction Methods for Lossless Coding
    Schiopu, Ionut
    Huang, Hongyue
    Munteanu, Adrian
    28TH EUROPEAN SIGNAL PROCESSING CONFERENCE (EUSIPCO 2020), 2021, : 521 - 525
  • [7] DeepSipred: A deep-learning-based approach on siRNA inhibition prediction
    Liu, Bin
    Huang, Huiya
    Liao, Weixi
    Pan, Xiaoyong
    Jin, Cheng
    Yuan, Ye
    PROCEEDINGS OF 2024 4TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND INTELLIGENT COMPUTING, BIC 2024, 2024, : 430 - 436
  • [8] DeepPL: A deep-learning-based tool for the prediction of bacteriophage lifecycle
    Zhang, Yujie
    Mao, Mark
    Zhang, Robert
    Liao, Yen-Te
    Wu, Vivian C. H.
    PLOS COMPUTATIONAL BIOLOGY, 2024, 20 (10)
  • [9] Deep-Learning-Based Prediction of the Tetragonal → Cubic Transition in Davemaoite
    Wu, Fulun
    Sun, Yang
    Wan, Tianqi
    Wu, Shunqing
    Wentzcovitch, Renata M.
    GEOPHYSICAL RESEARCH LETTERS, 2024, 51 (12)
  • [10] Progress made in the efficacy and viability of deep-learning-based noise reduction
    Healy, Eric W.
    Johnson, Eric M.
    Pandey, Ashutosh
    Wang, DeLiang
    JOURNAL OF THE ACOUSTICAL SOCIETY OF AMERICA, 2023, 153 (05): : 2751 - 2768