Tandem intermolecular [4+2] cycloadditions are catalysed by glycosylated enzymes for natural product biosynthesis

被引:19
|
作者
Liu, Jiawang [1 ]
Lu, Jiayan [2 ,3 ]
Zhang, Chen [1 ]
Zhou, Qingyang [4 ]
Jamieson, Cooper S. [4 ]
Shang, Changhui [1 ]
Houk, K. N. [4 ]
Zhou, Jiahai [3 ]
Hu, Youcai [1 ,5 ,6 ]
机构
[1] Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, State Key Lab Bioact Subst & Funct Nat Med, Beijing, Peoples R China
[2] Chinese Acad Sci, Shanghai Inst Organ Chem, State Key Lab Bioorgan & Nat Prod Chem, Shanghai, Peoples R China
[3] Chinese Acad Sci, Shenzhen Inst Synthet Biol, Shenzhen Inst Adv Technol, CAS Key Lab Quantitat Engn Biol, Shenzhen, Peoples R China
[4] Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
[5] Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, NHC Key Lab Biosynth Nat Prod, Beijing, Peoples R China
[6] Chinese Acad Med Sci & Peking Union Med Coll, Inst Mat Med, CAMS Key Lab Enzyme & Catalysis Nat Drugs, Beijing, Peoples R China
基金
美国国家卫生研究院;
关键词
DIELS-ALDER REACTION; BIOMIMETIC SYNTHESIS; BASIS-SETS; BISTROPOLONE; PROBE;
D O I
10.1038/s41557-023-01260-8
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Tandem Diels-Alder reactions are frequently used in the construction of polycyclic ring systems in complex organic compounds. Unlike the many Diels-Alderases (DAases) that catalyse a single cycloaddition, enzymes for multiple Diels-Alder reactions are rare. Here we demonstrate that two calcium-ion-dependent glycosylated enzymes, EupfF and PycR1, independently catalyse sequential, intermolecular Diels-Alder reactions in the biosynthesis of bistropolone-sesquiterpenes. We elucidate the origins of catalysis and stereoselectivity within these DAases through analysis of enzyme co-crystal structures, together with computational and mutational studies. These enzymes are secreted as glycoproteins with diverse N-glycans. The N-glycan at N211 in PycR1 significantly increases the affinity to the calcium ion, which in turn regulates the active cavity, making it specifically interact with substrates to accelerate the tandem [4 + 2] cycloaddition. The synergistic effect of the calcium ion and N-glycan on the catalytic centre of enzymes involved in secondary metabolism, especially for complex tandem reactions, can extend our understanding of protein evolution and improve the artificial design of biocatalysts.
引用
收藏
页码:1083 / +
页数:24
相关论文
共 50 条
  • [1] Tandem intermolecular [4 + 2] cycloadditions are catalysed by glycosylated enzymes for natural product biosynthesis
    Jiawang Liu
    Jiayan Lu
    Chen Zhang
    Qingyang Zhou
    Cooper S. Jamieson
    Changhui Shang
    K. N. Houk
    Jiahai Zhou
    Youcai Hu
    Nature Chemistry, 2023, 15 : 1083 - 1090
  • [2] Iron-sulphur protein catalysed [4+2] cycloadditions in natural product biosynthesis
    Zheng, Yu
    Sakai, Katsuyuki
    Watanabe, Kohei
    Takagi, Hiroshi
    Sato-Shiozaki, Yumi
    Misumi, Yuko
    Miyanoiri, Yohei
    Kurisu, Genji
    Nogawa, Toshihiko
    Takita, Ryo
    Takahashi, Shunji
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [3] FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis
    Gao, Lei
    Su, Cong
    Du, Xiaoxia
    Wang, Ruishan
    Chen, Shuming
    Zhou, Yu
    Liu, Chengwei
    Liu, Xiaojing
    Tian, Runze
    Zhang, Liyun
    Xie, Kebo
    Chen, She
    Guo, Qianqian
    Guo, Lanping
    Hano, Yoshio
    Shimazaki, Manabu
    Minami, Atsushi
    Oikawa, Hideaki
    Huang, Niu
    Houk, K. N.
    Huang, Luqi
    Dai, Jungui
    Lei, Xiaoguang
    NATURE CHEMISTRY, 2020, 12 (07) : 620 - +
  • [4] FAD-dependent enzyme-catalysed intermolecular [4+2] cycloaddition in natural product biosynthesis
    Lei Gao
    Cong Su
    Xiaoxia Du
    Ruishan Wang
    Shuming Chen
    Yu Zhou
    Chengwei Liu
    Xiaojing Liu
    Runze Tian
    Liyun Zhang
    Kebo Xie
    She Chen
    Qianqian Guo
    Lanping Guo
    Yoshio Hano
    Manabu Shimazaki
    Atsushi Minami
    Hideaki Oikawa
    Niu Huang
    K. N. Houk
    Luqi Huang
    Jungui Dai
    Xiaoguang Lei
    Nature Chemistry, 2020, 12 : 620 - 628
  • [5] Intermolecular [4+2] cycloadditions of a reactive cyclopentadienone
    Harmata, Michael
    Gomes, Maria G.
    EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, 2006, 2006 (10) : 2273 - 2277
  • [6] Tandem [4+2]/[3+2] cycloadditions of nitroalkenes
    Denmark, SE
    Thorarensen, A
    CHEMICAL REVIEWS, 1996, 96 (01) : 137 - 165
  • [7] Enzymatic [4+2] Cycloadditions in the Biosynthesis of Spirotetramates and Spirotetronates
    Pang, B.
    Zhong, G.
    Tang, Z.
    Liu, W.
    SYNTHETIC BIOLOGY AND METABOLIC ENGINEERING IN PLANTS AND MICROBES, PT A: METABOLISM IN MICROBES, 2016, 575 : 39 - 63
  • [8] Tandem [4+2]/[3+2] cycloadditions with nitroethylene
    Denmark, SE
    Hurd, AR
    JOURNAL OF ORGANIC CHEMISTRY, 1998, 63 (09): : 3045 - 3050
  • [9] Chiral Isochalcogenourea-Catalysed Enantioselective (4+2) Cycloadditions of Allenoates
    Vogl, Lukas S.
    Mayer, Peter
    Robiette, Raphael
    Waser, Mario
    ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2024, 63 (02)
  • [10] A Metal-Free Cyclobutadiene Reagent for Intermolecular [4+2] Cycloadditions
    Boswell, Benjamin R.
    Mansson, Carl M. F.
    Cabrera, Gabrielle E.
    Hansen, Calvin R.
    Oliver, Allen G.
    Burns, Noah Z.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2023, 145 (10) : 5631 - 5636