Bayesian framework for multi-source data integration-Application to human extrapolation from preclinical studies

被引:0
|
作者
Boulet, Sandrine [1 ,2 ]
Ursino, Moreno [1 ,2 ,3 ]
Michelet, Robin [4 ]
Aulin, Linda B. S. [4 ]
Kloft, Charlotte [4 ]
Comets, Emmanuelle [5 ,6 ]
Zohar, Sarah [1 ,2 ,7 ]
机构
[1] Inria, HeKA, Paris, France
[2] Univ Paris Cite, Sorbonne Univ, Ctr Rech Cordeliers, INSERM, Paris, France
[3] AP HP, Assistance Publ Hop Paris, Unit Clin Epidemiol, INSERM,CIC EC 1426, F-75019 Paris, France
[4] Inst Pharm, Dept Clin Pharm & Biochem, Freie Universitaet Berlin, Berlin, Germany
[5] Univ Rennes, Irset Inst Rech Sante Environm & Travail, INSERM, EHESP,UMRS 1085, Rennes, France
[6] Univ Paris Cite, INSERM, IAME, Paris, France
[7] Inria, Equipe HeKA, INSERM, PariSante Campus,10 Rue Oradour Sur Glane, F-75015 Paris, France
关键词
Commensurability; Hellinger distance; posteriors conflict; posteriors merging; translational; INHIBITOR LY2157299 MONOHYDRATE; CLINICAL-TRIALS; MODEL; SIZE;
D O I
10.1177/09622802241231493
中图分类号
R19 [保健组织与事业(卫生事业管理)];
学科分类号
摘要
In preclinical investigations, for example, in in vitro, in vivo, and in silico studies, the pharmacokinetic, pharmacodynamic, and toxicological characteristics of a drug are evaluated before advancing to first-in-man trial. Usually, each study is analyzed independently and the human dose range does not leverage the knowledge gained from all studies. Taking into account all preclinical data through inferential procedures can be particularly interesting in obtaining a more precise and reliable starting dose and dose range. Our objective is to propose a Bayesian framework for multi-source data integration, customizable, and tailored to the specific research question. We focused on preclinical results extrapolated to humans, which allowed us to predict the quantities of interest (e.g. maximum tolerated dose, etc.) in humans. We build an approach, divided into four steps, based on a sequential parameter estimation for each study, extrapolation to human, commensurability checking between posterior distributions and final information merging to increase the precision of estimation. The new framework is evaluated via an extensive simulation study, based on a real-life example in oncology. Our approach allows us to better use all the information compared to a standard framework, reducing uncertainty in the predictions and potentially leading to a more efficient dose selection.
引用
收藏
页码:574 / 588
页数:15
相关论文
共 50 条
  • [1] Geomodeling with integration of multi-source data by Bayesian kriging in underground space
    Li, Xiaojun
    Li, Peinan
    Zhu, Hehua
    Liu, Jun
    Tongji Daxue Xuebao/Journal of Tongji University, 2014, 42 (03): : 406 - 412
  • [2] Bayesian analysis of multi-source data
    Bhat, P. C.
    Prosper, H. B.
    Snyder, S. S.
    Physics Letters. Section B: Nuclear, Elementary Particle and High-Energy Physics, 407 (01):
  • [3] Bayesian analysis of multi-source data
    Bhat, PC
    Prosper, HB
    Snyder, SS
    PHYSICS LETTERS B, 1997, 407 (01) : 73 - 78
  • [4] A unified framework for the integration of multiple hierarchical clusterings or networks from multi-source data
    Hulot, Audrey
    Laloe, Denis
    Jaffrezic, Florence
    BMC BIOINFORMATICS, 2021, 22 (01)
  • [5] A unified framework for the integration of multiple hierarchical clusterings or networks from multi-source data
    Audrey Hulot
    Denis Laloë
    Florence Jaffrézic
    BMC Bioinformatics, 22
  • [6] Makar: A Framework for Multi-source Studies based on Unstructured Data
    Birrer, Mathias
    Rani, Pooja
    Panichella, Sebastiano
    Nierstrasz, Oscar
    2021 IEEE INTERNATIONAL CONFERENCE ON SOFTWARE ANALYSIS, EVOLUTION AND REENGINEERING (SANER 2021), 2021, : 577 - 581
  • [7] A framework for multi-source data fusion
    Yager, RR
    INFORMATION SCIENCES, 2004, 163 (1-3) : 175 - 200
  • [8] A Bayesian Framework for Collaborative Multi-Source Signal Sensing
    Couillet, Romain
    Debbah, Merouane
    IEEE TRANSACTIONS ON SIGNAL PROCESSING, 2010, 58 (10) : 5186 - 5195
  • [9] A General Multi-Source Data Fusion Framework
    Liu, Weiming
    Zhang, Chen
    Yu, Bin
    Li, Yitong
    ICMLC 2019: 2019 11TH INTERNATIONAL CONFERENCE ON MACHINE LEARNING AND COMPUTING, 2019, : 285 - 289
  • [10] Coal seam surface modeling and updating with multi-source data integration using Bayesian Geostatistics
    Li, Xiaojun
    Li, Peinan
    Zhu, Hehua
    ENGINEERING GEOLOGY, 2013, 164 : 208 - 221