Beyond CNNs: Exploiting Further Inherent Symmetries in Medical Image Segmentation

被引:10
|
作者
Pang, Shuchao [1 ,2 ]
Du, Anan [3 ]
Orgun, Mehmet A. [2 ]
Wang, Yan [2 ]
Sheng, Quan Z. [2 ]
Wang, Shoujin [4 ]
Huang, Xiaoshui [5 ]
Yu, Zhenmei [6 ]
机构
[1] Nanjing Univ Sci & Technol, Sch Cyber Sci & Engn, Nanjing 210094, Peoples R China
[2] Macquarie Univ, Sch Comp, Sydney, NSW 2109, Australia
[3] Univ Technol Sydney, Sch Elect & Data Engn, Ultimo, NSW 2007, Australia
[4] Univ Technol Sydney, Data Sci Inst, Ultimo, NSW 2007, Australia
[5] Shanghai AI Lab, Shanghai 200433, Peoples R China
[6] Shandong Womens Univ, Sch Data & Comp Sci, Jinan 250014, Peoples R China
基金
中国国家自然科学基金;
关键词
Image segmentation; Task analysis; Medical diagnostic imaging; Computational modeling; Kernel; Solid modeling; Context modeling; Control across kernels; group equivariant segmentation framework; medical image segmentation; neural networks; visualization analysis; VESSEL SEGMENTATION; NETWORK;
D O I
10.1109/TCYB.2022.3195447
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Automatic tumor or lesion segmentation is a crucial step in medical image analysis for computer-aided diagnosis. Although the existing methods based on convolutional neural networks (CNNs) have achieved the state-of-the-art performance, many challenges still remain in medical tumor segmentation. This is because, although the human visual system can detect symmetries in 2-D images effectively, regular CNNs can only exploit translation invariance, overlooking further inherent symmetries existing in medical images, such as rotations and reflections. To solve this problem, we propose a novel group equivariant segmentation framework by encoding those inherent symmetries for learning more precise representations. First, kernel-based equivariant operations are devised on each orientation, which allows it to effectively address the gaps of learning symmetries in existing approaches. Then, to keep segmentation networks globally equivariant, we design distinctive group layers with layer-wise symmetry constraints. Finally, based on our novel framework, extensive experiments conducted on real-world clinical data demonstrate that a group equivariant Res-UNet (called GER-UNet) outperforms its regular CNN-based counterpart and the state-of-the-art segmentation methods in the tasks of hepatic tumor segmentation, COVID-19 lung infection segmentation, and retinal vessel detection. More importantly, the newly built GER-UNet also shows potential in reducing the sample complexity and the redundancy of filters, upgrading current segmentation CNNs, and delineating organs on other medical imaging modalities.
引用
收藏
页码:6776 / 6787
页数:12
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