Disulfidptosis characterizes the tumor microenvironment and predicts immunotherapy sensitivity and prognosis in bladder cancer

被引:2
|
作者
Pan, Guizhen [1 ]
Xie, Huan [2 ]
Xia, Yeye [1 ,3 ]
机构
[1] Anhui Med Univ, Affiliated Hosp 1, Dept Radiat Oncol, Hefei, Peoples R China
[2] Southern Med Univ, Affiliated Hosp 3, Dept Urol, Guangzhou, Peoples R China
[3] Chengdu Fifth Peoples Hosp, Dept Oncol, Chengdu, Sichuan, Peoples R China
关键词
Disulfidptosis; Bladder cancer; Immune microenvironment; Bioinformatics; Tumor subgroups; Prognosis signature; IMMUNE CELLS; TOOL;
D O I
10.1016/j.heliyon.2024.e25573
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background: Bladder cancer (BLCA) is prone to metastasis and has poor prognosis with unsatisfactory treatment responsiveness. Disulfidptosis is a recently discovered, novel mode of cell death that is closely associated with human cancers. However, a comprehensive analysis of the relationship between disulfidptosis and BLCA is lacking. Therefore, this study aimed to explore the potential effect of disulfidptosis on BLCA and identify a biomarker for evaluating the prognosis and immunotherapy of patients with BLCA. Material and methods: We acquired BLCA RNA sequencing data from The Cancer Genome Atlas Urothelial Bladder Carcinoma (TCGA-BLCA) cohort (containing 19 normal samples and 409 tumor samples) and the GES39281 cohort (containing 94 tumor samples) which were used for external validation of the signature. Initially, we performed unsupervised consensus clustering to explore disulfidptosis-related subgroups. We then conducted functional enrichment analysis on these subgroups to gain insights into their biological significance and evaluate their immunotherapy response and chemotherapy sensitivity. Next, we conducted Least Absolute Shrinkage and Selection Operator (LASSO) regression and multivariate Cox regression to construct a prognostic signature in the TCGA training set for prognosis-related differentially expressed genes (DEGs) in the disulfidptosis-related subgroups. Subsequently, we used a receiver operating characteristic (ROC) curve and independent prognostic analysis to validate the predictive performance of the signature in the TCGA testing and the GES39281 cohorts. Finally, we explored the therapeutic value of this signature in patients with BLCA, in terms of immunotherapy and chemotherapy. Result: In this study, we obtained two subgroups: DRG-high (238 samples) and DRG-low (160 samples). The DRG-high group exhibited a poor survival rate compared to the DRG-low group and had a significant association with tumor grade, stage, and metastasis. Additionally, several pathways related to cancer and the immune system were enriched in the high-DRG group. Moreover, the DRG-high group exhibited higher expression of PD1 and CTLA4 and had a better response to immunotherapy in patients with both PD1 and CTLA4 positivity. Conversely, the DRG-high group was more sensitive to common chemotherapeutic agents. A prognostic signature was created, consisting of COL5A1, DIRAS3, NKG7, and POLR3G and validated as having a robust predictive capability. Patients in the low -risk -score group had more immune cells associated with tumor suppression and better immunotherapy outcomes. Conclusion: This study contributes to our understanding of the characteristics of disulfidptosis- related subgroups in BLCA. Disulfidptosis-related signatures can be used to assess the prognosis and immunotherapy of patients with BLCA.
引用
收藏
页数:20
相关论文
共 50 条
  • [1] Disulfidptosis-related signature predicts prognosis and characterizes the immune microenvironment in hepatocellular carcinoma
    Jun Tang
    Xintong Peng
    Desheng Xiao
    Shuang Liu
    Yongguang Tao
    Long Shu
    Cancer Cell International, 24
  • [2] Disulfidptosis-related signature predicts prognosis and characterizes the immune microenvironment in hepatocellular carcinoma
    Tang, Jun
    Peng, Xintong
    Xiao, Desheng
    Liu, Shuang
    Tao, Yongguang
    Shu, Long
    CANCER CELL INTERNATIONAL, 2024, 24 (01)
  • [3] Disulfidptosis signature predicts immune microenvironment and prognosis of gastric cancer
    Liu, Zitao
    Sun, Liang
    Zhu, Wenjie
    Zhu, Jinfeng
    Wu, Changlei
    Peng, Xingyu
    Tian, Huakai
    Huang, Chao
    Zhu, Zhengming
    BIOLOGY DIRECT, 2024, 19 (01)
  • [4] Cuproptosis depicts tumor microenvironment phenotypes and predicts precision immunotherapy and prognosis in bladder carcinoma
    Li, Huihuang
    Zu, Xiongbing
    Hu, Jiao
    Xiao, Zicheng
    Cai, Zhiyong
    Gao, Ning
    Chen, Jinbo
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [5] A novel angiogenesis-associated risk score predicts prognosis and characterizes the tumor microenvironment in colon cancer
    Li, Xin
    Deng, Yiqiao
    Li, Zhiyu
    Zhao, Hong
    TRANSLATIONAL CANCER RESEARCH, 2024, 13 (05) : 2094 - 2107
  • [6] Tumor Microenvironment Analysis Identified Subtypes Associated With the Prognosis and the Tumor Response to Immunotherapy in Bladder Cancer
    Zhang, Hongxian
    Song, Jiwen
    Dong, Junqiang
    Liu, Zhuo
    Lin, Lixuan
    Wang, Bing
    Ma, Qiang
    Ma, Lulin
    FRONTIERS IN GENETICS, 2021, 12
  • [7] The Tumor Microenvironment and Immunotherapy in Prostate and Bladder Cancer
    Nair, Sujit S.
    Weil, Rachel
    Dovey, Zachary
    Davis, Avery
    Tewari, Ashutosh K.
    UROLOGIC CLINICS OF NORTH AMERICA, 2020, 47 (04) : E17 - +
  • [8] SUMOylation Pattern Predicts Prognosis and Indicates Tumor Microenvironment Infiltration Characterization in Bladder Cancer
    Xia, Qi-Dong
    Sun, Jian-Xuan
    Xun, Yang
    Xiao, Jun
    Liu, Chen-Qian
    Xu, Jin-Zhou
    An, Ye
    Xu, Meng-Yao
    Liu, Zheng
    Wang, Shao-Gang
    Hu, Jia
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [9] Prognosis Prediction of Disulfidptosis-Related Genes in Bladder Cancer and a Comprehensive Analysis of Immunotherapy
    Jiang, Chonghao
    Xiao, Yonggui
    Xu, Danping
    Huili, Youlong
    Nie, Shiwen
    Li, Hubo
    Guan, Xiaohai
    Cao, Fenghong
    CRITICAL REVIEWS IN EUKARYOTIC GENE EXPRESSION, 2023, 33 (06): : 73 - 86
  • [10] Landscape of the intratumroal microenvironment in bladder cancer: Implications for prognosis and immunotherapy
    Bian, Zichen
    Chen, Jia
    Liu, Chang
    Ge, Qintao
    Zhang, Meng
    Meng, Jialin
    Liang, Chaozhao
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2023, 21 : 74 - 85