Microviruses: AWorld Beyond phiX174

被引:10
|
作者
Kirchberger, Paul C. [1 ,2 ]
Ochman, Howard [1 ]
机构
[1] Univ Texas Austin, Dept Mol Biosci, Austin, TX 78712 USA
[2] Oklahoma State Univ, Dept Microbiol & Mol Genet, Stillwater, OK 74078 USA
关键词
Microviridae; single-stranded DNA phages; virus taxonomy; virus evolution; virome; metagenomics; SINGLE-STRANDED-DNA; CHLAMYDIAPHAGE CHP2; NUCLEOTIDE-SEQUENCE; SPIROPLASMA VIRUS; BACTERIOPHAGE; GUT; EVOLUTION; PHAGE; AMPLIFICATION; PROTEINS;
D O I
10.1146/annurev-virology-100120-011239
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two decades of metagenomic analyses have revealed that in many environments, small (similar to 5 kb), single-strandedDNAphages of the family Microviridae dominate the virome. Although the emblematic microvirus phiX174 is ubiquitous in the laboratory, most other microviruses, particularly those of the gokushovirus and amoyvirus lineages, have proven to be much more elusive. This puzzling lack of representative isolates has hindered insights into microviral biology. Furthermore, the idiosyncratic size and nature of their genomes have resulted in considerable misjudgments of their actual abundance in nature. Fortunately, recent successes in microvirus isolation and improved metagenomic methodologies can now provide us with more accurate appraisals of their abundance, their hosts, and their interactions. The emerging picture is that phiX174 and its relatives are rather rare and atypical microviruses, and that a tremendous diversity of other microviruses is ready for exploration.
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页码:99 / 118
页数:20
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