Identification of a coagulation-related signature correlated with immune infiltration and their prognostic implications in lung adenocarcinoma

被引:3
|
作者
Yang, Siqian [1 ,2 ,3 ]
Chen, Shiqi [1 ,2 ,4 ,5 ]
Zhao, Yue [1 ,2 ,4 ,5 ]
Wu, Tao [6 ]
Wang, Yuquan [1 ,2 ,3 ]
Li, Tingting [1 ,2 ,3 ]
Fu, Liwan [7 ]
Ye, Ting [1 ,2 ,4 ,5 ]
Hu, Yue-Qing [1 ,2 ,3 ,8 ]
Chen, Haiquan [1 ,2 ,3 ,4 ,5 ]
机构
[1] Fudan Univ, Dept Thorac Surg, Shanghai Canc Ctr, 270 Dongan Rd, Shanghai 200032, Peoples R China
[2] Fudan Univ, State Key Lab Genet Engn, Shanghai Canc Ctr, 270 Dongan Rd, Shanghai 200032, Peoples R China
[3] Fudan Univ, Inst Biostat, Human Phenome Inst, Sch Life Sci, 2005 Songhu Rd, Shanghai 200438, Peoples R China
[4] Fudan Univ, Inst Thorac Oncol, Shanghai, Peoples R China
[5] Fudan Univ, Shanghai Med Coll, Dept Oncol, Shanghai, Peoples R China
[6] Shanghai Jiao Tong Univ, Sheng Yushou Ctr Cell Biol & Immunol, Sch Life Sci & Biotechnol, Joint Int Res Lab Metab & Dev Sci, Shanghai, Peoples R China
[7] Capital Med Univ, Beijing Childrens Hosp, Dept Ctr Noncommunicable Dis Management, Beijing, Peoples R China
[8] Fudan Univ, Shanghai Ctr Math Sci, Shanghai, Peoples R China
关键词
coagulation-related genes; immune infiltration; immunotherapy; lung adenocarcinoma; prognosis; CANCER; FIBRINOLYSIS; ACTIVATION; MECHANISMS; EXPRESSION;
D O I
10.1111/1759-7714.15121
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
BackgroundLung adenocarcinoma (LUAD) is a fatal form of lung cancer with a poor prognosis. Coagulation system had been confirmed closely related to tumor progression and the hypercoagulable state encouraged the immune infiltration and development of tumor cells, leading to a poor prognosis in cancer patients. However, the use of the coagulation-related genes (CRGs) for prognosis in LUAD has yet to be determined. In this study, we constructed an immune-related signature (CRRS) and identified a potential coagulation-related biomarker (P2RX1).MethodsWe obtained a total of 209 CRGs based on two coagulation-related KEGG pathways, then developed the CRRS signature by using the TCGA-LUAD RNA-seq data via the procedure of LASSO-Cox regression, stepwise-Cox regression, univariate and multivariate Cox regression. Grouped by the CRRS, Kaplan-Meier survival curves and receiver operating characteristic curves were drawn for the training and validation sets, respectively. In addition, single-sample gene set enrichment analysis was exploited to explore immune infiltration level. Moreover, immunophenotypes and immunotherapy grouped by CRRS were further analyzed.ResultsWe developed an immune-related signature (CRRS) composed of COL1A2, F2, PLAUR, C4BPA, and P2RX1 in LUAD. CRRS was an independent risk factor for overall survival and displayed stable and powerful performance. Additionally, CRRS possessed distinctly superior accuracy than traditional clinical variables and molecular features. Functional analysis indicated that the differentially high expressed genes in the low-risk group significantly enriched in T cell and B cell receptor signaling pathways. The low-risk group was sensitive to anti-PD-1/PD-L1 immunotherapy and displayed abundant immune infiltration and immune checkpoint gene expression. Finally, we identified an independent prognostic gene P2RX1. Low expression of P2RX1 associated with poor overall survival and decreased immune infiltration.ConclusionsOur study revealed a significant correlation between CRRS and immune infiltration. CRRS could serve as a promising tool to improve the clinical outcomes for individual LUAD patients. image
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收藏
页码:3295 / 3308
页数:14
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