Applications and Tuning Strategies for Transcription Factor-Based Metabolite Biosensors

被引:12
|
作者
Zhou, Gloria J. [1 ]
Zhang, Fuzhong [1 ,2 ,3 ]
机构
[1] Washington Univ, Dept Energy Environm & Chem Engn, St Louis, MO 63130 USA
[2] Washington Univ, Div Biol & Biomed Sci, St Louis, MO 63130 USA
[3] Washington Univ, Inst Mat Sci & Engn, St Louis, MO 63130 USA
来源
BIOSENSORS-BASEL | 2023年 / 13卷 / 04期
基金
美国国家卫生研究院;
关键词
transcription factor; biosensor tuning; biosensor applications; transcriptional control; translational control; high-throughput screening; dynamic regulation; metabolic heterogeneity; TO-CELL VARIATION; ESCHERICHIA-COLI; DYNAMIC-RANGE; BINDING; CIRCUITS; SYNTHASE; PATHWAY; DESIGN; ACID; TIME;
D O I
10.3390/bios13040428
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Transcription factor (TF)-based biosensors are widely used for the detection of metabolites and the regulation of cellular pathways in response to metabolites. Several challenges hinder the direct application of TF-based sensors to new hosts or metabolic pathways, which often requires extensive tuning to achieve the optimal performance. These tuning strategies can involve transcriptional or translational control depending on the parameter of interest. In this review, we highlight recent strategies for engineering TF-based biosensors to obtain the desired performance and discuss additional design considerations that may influence a biosensor's performance. We also examine applications of these sensors and suggest important areas for further work to continue the advancement of small-molecule biosensors.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Transcription factor-based biosensors enlightened by the analyte
    Fernandez-Lopez, Raul
    Ruiz, Raul
    de la Cruz, Fernando
    Moncalian, Gabriel
    FRONTIERS IN MICROBIOLOGY, 2015, 6
  • [2] Transcription Factor-Based Biosensors for Detecting Pathogens
    Jeon, Yangwon
    Lee, Yejin
    Kim, Keugtae
    Jang, Geupil
    Yoon, Youngdae
    BIOSENSORS-BASEL, 2022, 12 (07):
  • [3] Transcription Factor-Based Biosensors in High-Throughput Screening: Advances and Applications
    Cheng, Feng
    Tang, Xiao-Ling
    Kardashliev, Tsvetan
    BIOTECHNOLOGY JOURNAL, 2018, 13 (07)
  • [4] Transcription factor-based biosensors for screening and dynamic regulation
    Tellechea-Luzardo, Jonathan
    Stiebritz, Martin T.
    Carbonell, Pablo
    FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY, 2023, 11
  • [5] Biological Switches: Past and Future Milestones of Transcription Factor-Based Biosensors
    De Paepe, Brecht
    De Mey, Marjan
    ACS SYNTHETIC BIOLOGY, 2024, 14 (01): : 72 - 86
  • [6] Transcription factor-based biosensors for detection of naturally occurring phenolic acids
    Augustiniene, Ernesta
    Kutraite, Ingrida
    Valanciene, Egle
    Matulis, Paulius
    Jonuskiene, Ilona
    Malys, Naglis
    NEW BIOTECHNOLOGY, 2023, 78 : 1 - 12
  • [7] Transcription factor-based biosensors in biotechnology: current state and future prospects
    Regina Mahr
    Julia Frunzke
    Applied Microbiology and Biotechnology, 2016, 100 : 79 - 90
  • [8] Transcription factor-based biosensors in biotechnology: current state and future prospects
    Mahr, Regina
    Frunzke, Julia
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2016, 100 (01) : 79 - 90
  • [9] Lighting up yeast cell factories by transcription factor-based biosensors
    D'Ambrosio, Vasil
    Jensen, Michael K.
    FEMS YEAST RESEARCH, 2017, 17 (07)
  • [10] Building a minimal and generalizable model of transcription factor-based biosensors: Showcasing flavonoids
    Trabelsi, Heykel
    Koch, Mathilde
    Faulon, Jean-Loup
    BIOTECHNOLOGY AND BIOENGINEERING, 2018, 115 (09) : 2292 - 2304