Structural basis for the ligand promiscuity of the hydroxamate siderophore binding protein FtsB from Streptococcus pyogenes

被引:0
|
作者
Fernandez-Perez, Jorge [1 ]
Senoo, Akinobu [1 ,2 ]
Caaveiro, Jose M. M. [2 ]
Nakakido, Makoto [3 ]
de Vega, Susana [4 ]
Nakagawa, Ichiro [5 ]
Tsumoto, Kouhei [1 ,3 ,4 ]
机构
[1] Univ Tokyo, Sch Engn, Dept Bioengn, 7-3-1 Hongo,Bunkyo-ku, Tokyo 1138656, Japan
[2] Kyushu Univ, Grad Sch Pharmaceut Sci, Lab Prot Drug Discovery, 3-1-1 Maidashi,Higashi-ku, Fukuoka 8128582, Japan
[3] Univ Tokyo, Grad Sch Engn, Dept Chem & Biotechnol, 7-3-1 Hongo,Bunkyo-ku, Tokyo 1138656, Japan
[4] Univ Tokyo, Inst Med Sci, 4-6-1 Shirokanedai,Minato-ku, Tokyo 1088639, Japan
[5] Kyoto Univ, Grad Sch Med, Dept Microbiol, Yoshida-Konoe-cho, Sakyo-ku, Kyoto 6068501, Japan
基金
日本学术振兴会;
关键词
STAPHYLOCOCCUS-AUREUS; INDIUM COMPLEXES; ESCHERICHIA-COLI; IRON; TRANSPORT; FHUD2; ENTEROCHELIN; ACQUISITION; PNEUMONIAE; ALBOMYCIN;
D O I
10.1016/j.str.2024.09.018
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pathogenic bacteria must secure the uptake of nutritional metals such as iron for their growth, making their import systems attractive targets for the development of new antimicrobial modalities. In the pathogenic bacterium Streptococcus pyogenes, the iron uptake system FtsABCD transports iron encapsulated by siderophores of the hydroxamate class. However, the inability of S. pyogenes to produce these metabolites makes the biological and clinical relevance of this route unresolved. Herein, we demonstrated that the periplasmic binding protein FtsB recognizes not only the hydroxamate siderophore ferrichrome, as previously documented, but also ferrioxamine E (FOE), ferrioxamine B (FOB), and bisucaberin (BIS), each of them with high affinity (nM level). Up to seven aromatic residues in the binding pocket accommodate the variable backbones of the different siderophores through CH-p interactions, explaining ligand promiscuity. Collectively, our observations revealed how S. pyogenes exploits the diverse xenosiderophores produced by other microorganisms as iron sources to secure this precious nutrient.
引用
收藏
页数:16
相关论文
共 50 条
  • [1] Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP
    Kornilov, Fedor D.
    Slonimskiy, Yury B.
    Lunegova, Daria A.
    Egorkin, Nikita A.
    Savitskaya, Anna G.
    Kleymenov, Sergey Yu.
    Maksimov, Eugene G.
    Goncharuk, Sergey A.
    Mineev, Konstantin S.
    Sluchanko, Nikolai N.
    COMMUNICATIONS BIOLOGY, 2023, 6 (01)
  • [2] Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP
    Fedor D. Kornilov
    Yury B. Slonimskiy
    Daria A. Lunegova
    Nikita A. Egorkin
    Anna G. Savitskaya
    Sergey Yu. Kleymenov
    Eugene G. Maksimov
    Sergey A. Goncharuk
    Konstantin S. Mineev
    Nikolai N. Sluchanko
    Communications Biology, 6
  • [3] Structural Insights into the Molecular Basis of the Ligand Promiscuity
    Sturm, Noe
    Desaphy, Jeremy
    Quinn, Ronald J.
    Rognan, Didier
    Kellenberger, Esther
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2012, 52 (09) : 2410 - 2421
  • [4] Structural basis for the recognition of human hemoglobin by the heme-acquisition protein Shr from Streptococcus pyogenes
    Akinobu Senoo
    Masato Hoshino
    Toshiki Shiomi
    Makoto Nakakido
    Satoru Nagatoishi
    Daisuke Kuroda
    Ichiro Nakagawa
    Jeremy R. H. Tame
    Jose M. M. Caaveiro
    Kouhei Tsumoto
    Scientific Reports, 14
  • [5] Structural basis for the recognition of human hemoglobin by the heme-acquisition protein Shr from Streptococcus pyogenes
    Senoo, Akinobu
    Hoshino, Masato
    Shiomi, Toshiki
    Nakakido, Makoto
    Nagatoishi, Satoru
    Kuroda, Daisuke
    Nakagawa, Ichiro
    Tame, Jeremy R. H.
    Caaveiro, Jose M. M.
    Tsumoto, Kouhei
    SCIENTIFIC REPORTS, 2024, 14 (01)
  • [6] Structural basis for promiscuity in ligand recognition by yjdF riboswitch
    Krochmal, Daniel
    Roman, Christina
    Lewicka, Anna
    Shao, Yaming
    Piccirilli, Joseph A.
    CELL DISCOVERY, 2024, 10 (01)
  • [7] Structural basis for promiscuity in ligand recognition by yjdF riboswitch
    Daniel Krochmal
    Christina Roman
    Anna Lewicka
    Yaming Shao
    Joseph A. Piccirilli
    Cell Discovery, 10
  • [8] A molecular basis for integrin αMβ2 ligand binding promiscuity
    Yakubenko, VP
    Lishko, VK
    Lam, SCT
    Ugarova, TP
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (50) : 48635 - 48642
  • [9] The Structural Basis of Pregnane X Receptor Binding Promiscuity
    Ngan, Chi-Ho
    Beglov, Dmitri
    Rudnitskaya, Aleksandra N.
    Kozakov, Dima
    Waxman, David J.
    Vajda, Sandor
    BIOCHEMISTRY, 2009, 48 (48) : 11572 - 11581
  • [10] Structural basis of pregnane X receptor binding promiscuity
    Ngan, Chi Ho
    Beglov, Dmitri
    Rudnitskaya, Aleksandra N.
    Kozakov, Dima
    Waxman, David J.
    Vajda, Sandor
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2010, 240