Target Discovery Driven by Chemical Biology and Computational Biology

被引:1
|
作者
Lyu, Bohai [1 ,2 ]
Gou, Wenfeng [1 ]
Xu, Feifei [1 ]
Chen, Leyuan [1 ]
Wang, Zhiyun [1 ]
Ren, Zhonghao [1 ,3 ]
Liu, Gaiting [1 ,2 ]
Li, Yiliang [1 ]
Hou, Wenbin [1 ]
机构
[1] Peking Union Med Coll & Chinese Acad Med Sci, Inst Radiat Med, Tianjin 300192, Peoples R China
[2] Tianjin Univ Tradit Chinese Med, Tianjin 301617, Peoples R China
[3] Shenyang Pharmaceut Univ, Dept Pharmacol, 103 Wenhua Rd, Shenyang 110016, Peoples R China
来源
CHEMICAL RECORD | 2025年 / 25卷 / 03期
基金
中国国家自然科学基金;
关键词
Chemical biology; Proteomics; Probes; Mass spectrometry; Computational biology; DATA-INDEPENDENT ACQUISITION; CORRELATION SPECTROSCOPY; COVALENT INHIBITOR; PROTEIN TARGETS; NANO-LC; DRUG; IDENTIFICATION; PROTEOMICS; QUANTIFICATION; CELLS;
D O I
10.1002/tcr.202400182
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Target identification is crucial for drug screening and development because it can reveal the mechanism of drug action and ensure the reliability and accuracy of the results. Chemical biology, an interdisciplinary field combining chemistry and biology, can assist in this process by studying the interactions between active molecular compounds and proteins and their physiological effects. It can also help predict potential drug targets or candidates, develop new biomarker assays and diagnostic reagents, and evaluate the selectivity and range of active compounds to reduce the risk of off-target effects. Chemical biology can achieve these goals using techniques such as changing protein thermal stability, enzyme sensitivity, and molecular structure and applying probes, isotope labeling and mass spectrometry. Concurrently, computational biology employs a diverse array of computational models to predict drug targets. This approach also offers innovative avenues for repurposing existing drugs. In this paper, we review the reported chemical biology and computational biology techniques for identifying different types of targets that can provide valuable insights for drug target discovery.
引用
收藏
页数:26
相关论文
共 50 条
  • [1] Chemical biology for drug discovery and target identification
    Kakeya, Hideaki
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 248
  • [2] Application of chemical biology in target identification and drug discovery
    Zhu, Yue
    Xiao, Ting
    Lei, Saifei
    Zhou, Fulai
    Wang, Ming-Wei
    ARCHIVES OF PHARMACAL RESEARCH, 2015, 38 (09) : 1642 - 1650
  • [3] Application of chemical biology in target identification and drug discovery
    Yue Zhu
    Ting Xiao
    Saifei Lei
    Fulai Zhou
    Ming-Wei Wang
    Archives of Pharmacal Research, 2015, 38 : 1642 - 1650
  • [4] Target identification and mechanism of action in chemical biology and drug discovery
    Schenone M.
    Dančík V.
    Wagner B.K.
    Clemons P.A.
    Nature Chemical Biology, 2013, 9 (4) : 232 - 240
  • [5] Target identification and mechanism of action in chemical biology and drug discovery
    Schenone, Monica
    Dancik, Vlado
    Wagner, Bridget K.
    Clemons, Paul A.
    NATURE CHEMICAL BIOLOGY, 2013, 9 (04) : 232 - 240
  • [6] Novel target discovery for glioblastoma using chemical biology fingerprinting
    Finlay, Darren
    Aza-Blanc, Pedro
    Dhruv, Harshil
    Eroshkin, Alexey
    Hauser, Craig
    Kiefer, Jeff
    Kim, Seungchan
    Long, Tao
    Oshima, Robert G.
    Peng, Sen
    Speyer, Gil
    Berens, Michael
    Vuori, Kristiina
    CANCER RESEARCH, 2017, 77
  • [7] Chemical Biology in Drug Discovery
    Castaldi, M. Paola
    Zuhl, Andrea
    Ricchiuto, Piero
    Hendricks, J. Adam
    ANNUAL REPORTS IN MEDICINAL CHEMISTRY, VOL 50: PLATFORM TECHNOLOGIES IN DRUG DISCOVERY AND VALIDATION, 2017, 50 : 335 - 370
  • [8] Chemical biology in drug discovery
    Hacker, Stephan M.
    Jessen-Trefzer, Claudia
    BIOLOGICAL CHEMISTRY, 2022, 403 (04) : 361 - 362
  • [9] Chemical biology & drug discovery
    Jones, Lyn H.
    Heinis, Christian
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2014, 88 : 1 - 2
  • [10] Computational chemical biology on the rise
    Brown, J. B.
    Bajorath, Juergen
    FUTURE MEDICINAL CHEMISTRY, 2019, 11 (01) : 1 - 3