Harnessing explainable artificial intelligence for patient-to-clinical-trial matching: A proof-of-concept pilot study using phase I oncology trials

被引:2
|
作者
Ghosh, Satanu [1 ]
Abushukair, Hassan Mohammed [2 ]
Ganesan, Arjun [3 ]
Pan, Chongle [3 ]
Naqash, Abdul Rafeh [4 ]
Lu, Kun [5 ]
机构
[1] Univ New Hampshire, Dept Comp Sci, Durham, NH USA
[2] Jordan Univ Sci & Technol, Irbid, Jordan
[3] Univ Oklahoma, Sch Comp Sci, Norman Campus, Norman, OK USA
[4] Univ Oklahoma, Stephenson Canc Ctr, Med Oncol, TSET Phase Program 1,Hlth Sci Campus, Oklahoma City, OK 73104 USA
[5] Univ Oklahoma, Sch Lib & Informat Studies, Norman Campus, Norman, OK 73019 USA
来源
PLOS ONE | 2024年 / 19卷 / 10期
关键词
D O I
10.1371/journal.pone.0311510
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
This study aims to develop explainable AI methods for matching patients with phase 1 oncology clinical trials using Natural Language Processing (NLP) techniques to address challenges in patient recruitment for improved efficiency in drug development. A prototype system based on modern NLP techniques has been developed to match patient records with phase 1 oncology clinical trial protocols. Four criteria are considered for the matching: cancer type, performance status, genetic mutation, and measurable disease. The system outputs a summary matching score along with explanations of the evidence. The outputs of the AI system were evaluated against the ground truth matching results provided by the domain expert on a dataset of twelve synthesized dummy patient records and six clinical trial protocols. The system achieved a precision of 73.68%, sensitivity/recall of 56%, accuracy of 77.78%, and specificity of 89.36%. Further investigation into the misclassified cases indicated that ambiguity of abbreviation and misunderstanding of context are significant contributors to errors. The system found evidence of no matching for all false positive cases. To the best of our knowledge, no system in the public domain currently deploys an explainable AI-based approach to identify optimal patients for phase 1 oncology trials. This initial attempt to develop an AI system for patients and clinical trial matching in the context of phase 1 oncology trials showed promising results that are set to increase efficiency without sacrificing quality in patient-trial matching.
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页数:14
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