A composite genome approach to identify phylogenetically informative data from next-generation sequencing

被引:0
|
作者
Schwartz, Rachel S. [1 ]
Harkins, Kelly M. [2 ,3 ]
Stone, Anne C. [2 ]
Cartwright, Reed A. [1 ,4 ]
机构
[1] Arizona State University, The Biodesign Institute, Tempe,AZ, United States
[2] Arizona State University, School of Human Evolution and Social Change, Tempe,AZ, United States
[3] University of California - Santa Cruz, Department of Anthropology, Santa Cruz,CA, United States
[4] Arizona State University, School of Life Sciences, Tempe,AZ, United States
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
Compilation and indexing terms; Copyright 2025 Elsevier Inc;
D O I
暂无
中图分类号
学科分类号
摘要
Technology transfer - Mammals - Genes
引用
收藏
相关论文
共 50 条
  • [1] A composite genome approach to identify phylogenetically informative data from next-generation sequencing
    Schwartz, Rachel S.
    Harkins, Kelly M.
    Stone, Anne C.
    Cartwright, Reed A.
    BMC BIOINFORMATICS, 2015, 16
  • [2] A composite genome approach to identify phylogenetically informative data from next-generation sequencing
    Rachel S. Schwartz
    Kelly M. Harkins
    Anne C. Stone
    Reed A. Cartwright
    BMC Bioinformatics, 16
  • [3] The Genome Assembly Model for Next-Generation Sequencing Data
    Wang, Yirong
    Wei, Chengdong
    Zhang, Xiaodong
    Cen, Tailin
    PROCEEDINGS OF THE 2017 INTERNATIONAL CONFERENCE ON APPLIED MATHEMATICS, MODELLING AND STATISTICS APPLICATION (AMMSA 2017), 2017, 141 : 97 - 101
  • [4] ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
    Margarido, Gabriel R. A.
    Heckerman, David
    PLOS COMPUTATIONAL BIOLOGY, 2015, 11 (04)
  • [5] Zseq: An Approach for Preprocessing Next-Generation Sequencing Data
    Alkhateeb, Abedalrhman
    Rueda, Luis
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2017, 24 (08) : 746 - 755
  • [6] NGSNGS: next-generation simulator for next-generation sequencing data
    Henriksen, Rasmus Amund
    Zhao, Lei
    Korneliussen, Thorfinn Sand
    BIOINFORMATICS, 2023, 39 (01)
  • [7] A survey of tools for variant analysis of next-generation genome sequencing data
    Pabinger, Stephan
    Dander, Andreas
    Fischer, Maria
    Snajder, Rene
    Sperk, Michael
    Efremova, Mirjana
    Krabichler, Birgit
    Speicher, Michael R.
    Zschocke, Johannes
    Trajanoski, Zlatko
    BRIEFINGS IN BIOINFORMATICS, 2014, 15 (02) : 256 - 278
  • [8] NEXT-GENERATION SEQUENCING AND GENOME EVOLUTION IN ALLOPOLYPLOIDS
    Buggs, Richard J. A.
    Renny-Byfield, Simon
    Chester, Michael
    Jordon-Thaden, Ingrid E.
    Viccini, Lyderson Facio
    Chamala, Srikar
    Leitch, Andrew R.
    Schnable, Patrick S.
    Barbazuk, W. Bradley
    Soltis, Pamela S.
    Soltis, Douglas E.
    AMERICAN JOURNAL OF BOTANY, 2012, 99 (02) : 372 - 382
  • [9] Next-generation sequencing and large genome assemblies
    Henson, Joseph
    Tischler, German
    Ning, Zemin
    PHARMACOGENOMICS, 2012, 13 (08) : 901 - 915
  • [10] IMPUTOR: Phylogenetically Aware Software for Imputation of Errors in Next-Generation Sequencing
    Jobin, Matthew
    Schurz, Haiko
    Henn, Brenna M.
    GENOME BIOLOGY AND EVOLUTION, 2018, 10 (05): : 1248 - 1254