Theoretical study on molecular stability, reactivity, and drug potential of cirsilineol from DFT and molecular docking methods

被引:2
|
作者
Paneru, Tirth Raj [1 ,2 ,5 ]
Chaudhary, Manoj Kumar [2 ,3 ]
Tandon, Poonam [2 ]
Chaudhary, Tarun [5 ]
Joshi, Bhawani Datt [4 ]
机构
[1] Far Western Univ, Dept Gen Sci, Mahendranagar 10400, Nepal
[2] Univ Lucknow, Dept Phys, Lucknow 226007, India
[3] Tribhuvan Univ, Inst Sci & Technol, Dept Phys, Amrit Campus, Kathmandu 44600, Nepal
[4] Tribhuvan Univ, Dept Phys, Siddhanath Sci Campus, Mahendranagar 10406, Nepal
[5] Tribhuvan Univ, Cent Dept Phys, Kathmandu, Kirtipur, Nepal
来源
CHEMICAL PHYSICS IMPACT | 2024年 / 8卷
关键词
Cirsilineol; Natural bond orbital; Reduced density gradient; Global reactivity; QTAIM; Aldose reductase; HYDROGEN-BONDS; DENSITY; ATOMS; BEHAVIOR;
D O I
10.1016/j.chphi.2024.100641
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Molecular stability, chemical reactive sites, and global reactivity descriptors of cirsilineol have been investigated by using computational and molecular docking approaches. The density functional theory (DFT) was employed with the functional B3LYP/6-311++G(d,p). The lowest energy structure of cirsilineol was investigated, with an energy of -767,080.1261 kcal/mol. The hydrogen bonding investigation based on the QTAIM study showed that H31...O5 has the strongest interaction. RDG isosurface has also provided insights into intra-molecular hydrogen bonding and other interactions. The high ELF value for hydrogen suggested that electrons were more localized in it. The lone pair interaction LP(2)O6 -> pi*(C18-C20) with a higher stabilization energy of 73.08 kcal/mol is crucial to the stabilization of the molecule, and the oxygens and hydrogens with methyl groups function as nucleophilic and electrophilic sites in the molecule. The chemical reactivity and hardness of the molecule in terms of the HOMO-LUMO energy gap (Delta EL-H) have been carried. Moreover, molecular docking of the title molecule with the enzyme Aldose reductase has been performed to check the binding interaction as well as the reactive sites of the molecule.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Computational evaluation on molecular stability, reactivity, and drug potential of frovatriptan from DFT and molecular docking approach
    Chaudhary, Manoj Kumar
    Srivastava, Anubha
    Singh, Keshav Kumar
    Tandon, Poonam
    Joshi, Bhawani Datt
    COMPUTATIONAL AND THEORETICAL CHEMISTRY, 2020, 1191
  • [2] A theoretical study on molecular structure, chemical reactivity and molecular docking studies on dalbergin and methyldalbergin
    Shweta
    Khan, Eram
    Tandon, Poonam
    Maurya, Rakesh
    Kumar, Padam
    JOURNAL OF MOLECULAR STRUCTURE, 2019, 1183 : 100 - 106
  • [3] The theoretical investigation of monohydroxy flavone: A combined DFT and molecular docking study
    Zhang, Min
    Li, Yuye
    Zhu, Tingting
    JOURNAL OF MOLECULAR STRUCTURE, 2022, 1250
  • [4] Computational evaluation of the reactivity and pharmaceutical potential of an organic amine: A DFT, molecular dynamics simulations and molecular docking approach
    Abraham, Christina Susan
    Muthu, S.
    Prasana, Johanan Christian
    Armakovic, Stevan
    Armakovic, Sanja J.
    Rizwana, Fathima B.
    Geoffrey, Ben
    David, Host Antony R.
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2019, 222
  • [5] Molecular docking, drug-likeness and DFT study of some modified tetrahydrocurcumins as potential anticancer agents
    Mahal, Ahmed
    Al-Janabi, Marwan
    Eyupoglu, Volkan
    Alkhouri, Anas
    Chtita, Samir
    Kadhim, Mustafa M.
    Obaidullah, Ahmad J.
    Alotaibi, Jawaher M.
    Wei, Xiaoyi
    Pratama, Mohammad Rizki Fadhil
    SAUDI PHARMACEUTICAL JOURNAL, 2024, 32 (01)
  • [6] MOLECULAR INTERACTION POTENTIAL - A NEW TOOL FOR THE THEORETICAL-STUDY OF MOLECULAR REACTIVITY
    OROZCO, M
    LUQUE, FJ
    JOURNAL OF COMPUTATIONAL CHEMISTRY, 1993, 14 (05) : 587 - 602
  • [7] Pharmacokinetics and drug-likeness of antidiabetic flavonoids: Molecular docking and DFT study
    Bitew, Mamaru
    Desalegn, Tegene
    Demissie, Taye B.
    Belayneh, Anteneh
    Endale, Milkyas
    Eswaramoorthy, Rajalakshmanan
    PLOS ONE, 2021, 16 (12):
  • [8] Theoretical Study of Azetidine Derivative by Quantum Chemical Methods, Molecular Docking and Molecular Dynamic Simulations
    Sinha, Prashasti
    Yadav, Anil Kumar
    CHEMISTRYSELECT, 2023, 8 (16):
  • [9] Molecular Docking and DFT Calculations of Anthracene: Insights from Quantum Chemical Methods
    Vijayakumar, Rajendran
    Viji, Arangarajan
    Vanasundari, Karuppaiya
    Balachandran, Vadivel
    Arockia Dass, Antony Prabhu
    CRYSTAL RESEARCH AND TECHNOLOGY, 2024, 59 (05)
  • [10] Computational assessment of the reactivity and pharmaceutical potential of novel triazole derivatives: An approach combining DFT calculations, molecular dynamics simulations, and molecular docking
    Tabti, Kamal
    Sbai, Abdelouahid
    Maghat, Hamid
    Lakhlifi, Tahar
    Bouachrine, Mohammed
    ARABIAN JOURNAL OF CHEMISTRY, 2024, 17 (01)