Deciphering immunodiffusion: In silico optimization for faster protein diagnostics

被引:1
|
作者
Liu, Chong [1 ]
Corrie, Simon [2 ,3 ,4 ]
Regenauer-Lieb, Klaus [5 ,6 ]
Hu, Manman [1 ]
机构
[1] Univ Hong Kong, Dept Civil Engn, Hong Kong, Peoples R China
[2] Monash Univ, Dept Chem & Biol Engn, Clayton, Vic 3800, Australia
[3] Monash Univ, Bioresource Proc Res Inst Australia BioPRIA, Clayton, Vic 3800, Australia
[4] Monash Univ, Ctr Impact AMR, Clayton, Vic 3800, Australia
[5] Curtin Univ, WA Sch Mines Minerals Energy & Chem Engn, Perth, WA, Australia
[6] UNSW Sydney, Sch Minerals & Energy Resources Engn, Sydney, NSW, Australia
基金
澳大利亚研究理事会;
关键词
Immunodiffusion; Precipitin ring; Precipitin complex; Reaction -diffusion systems; DIFFUSION; FRONT; GEL;
D O I
10.1016/j.talanta.2024.126385
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Immunodiffusion tests offer a simple yet powerful method for detecting protein antigens, but their long assay times hinder clinical utility. We unveil the complex interplay of parameters governing this process using finite element simulations. By meticulously validating our model against real-world data, we elucidate how initial concentrations and diffusivities of antigen and antibody shape the intensity, size, and formation time of the precipitin ring. Our key innovation lies in employing phase diagram analysis to map the combined effects of these parameters on assay performance. This framework enables rapid in silico parameter estimation, paving the way for the design of novel immunodiffusion assays with drastically reduced assay times. The presented approach holds immense potential for optimizing protein diagnostics for fast and reliable diagnostics.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Faster diagnostics
    O'Driscoll, Cath
    CHEMISTRY & INDUSTRY, 2022, 86 (04) : 6 - 6
  • [2] Locuaz: an in silico platform for protein binders optimization
    Barletta, German P.
    Tandiana, Rika
    Soler, Miguel
    Fortuna, Sara
    Rocchia, Walter
    BIOINFORMATICS, 2024, 40 (08)
  • [3] Making molecular diagnostics faster
    Wittwer, C.
    CLINICA CHIMICA ACTA, 2024, 558
  • [4] GELATIN FOR IMMUNODIFFUSION OF BASIC PROTEIN
    CROWLE, AJ
    HU, CC
    PROCEEDINGS OF THE SOCIETY FOR EXPERIMENTAL BIOLOGY AND MEDICINE, 1967, 126 (03): : 729 - &
  • [5] A method of faster in silico folding of proteins
    Hansmann U.H.E.
    Skřivánek Ja.
    Physics of Particles and Nuclei Letters, 2008, 5 (3) : 236 - 242
  • [6] Better and faster: improvements and optimization for mammalian recombinant protein production
    Almo, Steven C.
    Love, James D.
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2014, 26 : 39 - 43
  • [7] Deciphering aptamer-protein interactions for bovine sperm sorting through in silico and in vitro studies
    Singh, Sumit Kumar
    Mathur, Manya
    Kamboj, Himanshu
    Kaushik, Jai Kumar
    Mohanty, Ashok Kumar
    Kumar, Sudarshan
    MOLECULAR BIOLOGY REPORTS, 2025, 52 (01)
  • [8] In silico approach to deciphering the role of glycans in disease
    Lisacek, F.
    Alocci, D.
    Gastaldello, A.
    Mariethoz, J.
    FEBS OPEN BIO, 2018, 8 : 55 - 55
  • [9] PRINCIPLES OF PROTEIN ESTIMATION BY RADIAL IMMUNODIFFUSION
    GRANT, GH
    JOURNAL OF CLINICAL PATHOLOGY, 1971, 24 (01) : 89 - &
  • [10] Radial immunodiffusion optimization for immunoglobulin D detection
    Benkirane, K.
    Emond, J. P.
    CLINICAL BIOCHEMISTRY, 2008, 41 (14-15) : 1263 - 1264