PULSE SEQUENCES FOR REMOVAL OF THE EFFECTS OF CROSS-CORRELATION BETWEEN DIPOLAR AND CHEMICAL-SHIFT ANISOTROPY RELAXATION MECHANISM ON THE MEASUREMENT OF HETERONUCLEAR T1 AND T2 VALUES IN PROTEINS

被引:572
作者
KAY, LE
NICHOLSON, LK
DELAGLIO, F
BAX, A
TORCHIA, DA
机构
[1] NIDR,BONE RES BRANCH,BETHESDA,MD 20892
[2] NIDDKD,CHEM PHYS LAB,BETHESDA,MD 20892
来源
JOURNAL OF MAGNETIC RESONANCE | 1992年 / 97卷 / 02期
基金
英国医学研究理事会; 美国国家卫生研究院;
关键词
D O I
10.1016/0022-2364(92)90320-7
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The effects of cross correlation between dipolar and chemical-shift anisotropy relaxation interactions on the measurement of heteroatom T1 and T2 relaxation times in proteins is considered. It is shown that such effects can produce errors of approximately 25% in the measurement of 15N transverse relaxation times at a field strength of 11.8 T. Cross correlation has a less significant effect on the measurement of 15N spin-lattice relaxation rates and for proteins the errors in T1 decrease as a function of increasing molecular weight. Nevertheless, for T1 measurements at 11.8 T errors of approximately 15 and 5% are calculated for proteins with correlation times, τc, of 5 and 9 ns, respectively. Pulse sequences which eliminate dipolar and chemical-shift anisotropy cross-correlation effects are described. These sequences are used to make more accurate measurements of 15N T1 and T2 values of staphylococcal nuclease and to determine errors in these parameters that result when cross correlations are present. © 1992.
引用
收藏
页码:359 / 375
页数:17
相关论文
共 34 条
[1]   INFLUENCE OF CROSS-CORRELATION BETWEEN DIPOLAR AND ANISOTROPIC CHEMICAL-SHIFT RELAXATION MECHANISMS UPON LONGITUDINAL RELAXATION RATES OF N-15 IN MACROMOLECULES [J].
BOYD, J ;
HOMMEL, U ;
CAMPBELL, ID .
CHEMICAL PHYSICS LETTERS, 1990, 175 (05) :477-482
[2]   EFFECTS OF DIFFUSION ON FREE PRECESSION IN NUCLEAR MAGNETIC RESONANCE EXPERIMENTS [J].
CARR, HY ;
PURCELL, EM .
PHYSICAL REVIEW, 1954, 94 (03) :630-638
[3]   ANALYSIS OF THE BACKBONE DYNAMICS OF INTERLEUKIN-1-BETA USING 2-DIMENSIONAL INVERSE DETECTED HETERONUCLEAR N-15-H-1 NMR-SPECTROSCOPY [J].
CLORE, GM ;
DRISCOLL, PC ;
WINGFIELD, PT ;
GRONENBORN, AM .
BIOCHEMISTRY, 1990, 29 (32) :7387-7401
[4]   MODEL-INDEPENDENT AND MODEL-DEPENDENT ANALYSIS OF THE GLOBAL AND INTERNAL DYNAMICS OF CYCLOSPORINE-A [J].
DELLWO, MJ ;
WAND, AJ .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (13) :4571-4578
[5]   SYSTEMATIC BIAS IN THE MODEL-FREE ANALYSIS OF HETERONUCLEAR RELAXATION [J].
DELLWO, MJ ;
WAND, AJ .
JOURNAL OF MAGNETIC RESONANCE, 1991, 91 (03) :505-516
[6]  
Ernst R. R., 1987, PRINCIPLES NUCL MAGN, V1st
[7]   2D AND 3D NMR-SPECTROSCOPY EMPLOYING C-13-C-13 MAGNETIZATION TRANSFER BY ISOTROPIC MIXING - SPIN SYSTEM-IDENTIFICATION IN LARGE PROTEINS [J].
FESIK, SW ;
EATON, HL ;
OLEJNICZAK, ET ;
ZUIDERWEG, ERP ;
MCINTOSH, LP ;
DAHLQUIST, FW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (02) :886-888
[8]   INTERFERENCE EFFECTS IN THE RELAXATION OF A PAIR OF UNLIKE SPIN-1/2 NUCLEI [J].
GOLDMAN, M .
JOURNAL OF MAGNETIC RESONANCE, 1984, 60 (03) :437-452
[9]   BACKBONE DYNAMICS OF A MODEL MEMBRANE-PROTEIN - C-13 NMR-SPECTROSCOPY OF ALANINE METHYL-GROUPS IN DETERGENT-SOLUBILIZED M13 COAT PROTEIN [J].
HENRY, GD ;
WEINER, JH ;
SYKES, BD .
BIOCHEMISTRY, 1986, 25 (03) :590-598
[10]   DETERMINATION OF N-15 CHEMICAL-SHIFT TENSOR VIA N-15-H-2 DIPOLAR COUPLING IN BOC-GLYCYLGLYCYL[N-15]GLYCINE BENZYL ESTER [J].
HIYAMA, Y ;
NIU, CH ;
SILVERTON, JV ;
BAVOSO, A ;
TORCHIA, DA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1988, 110 (08) :2378-2383