The complete chloroplast genome sequence of Pometia tomentosa

被引:2
|
作者
Wang, Yi [1 ]
Yuan, Xiaolong [1 ]
Zhang, Jinfeng [1 ]
机构
[1] Yunnan Acad Forestry, Lab Forest Plant Cultivat & Utilizat, Kunming 650204, Yunnan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
关键词
Pometia tomentosa; chloroplast; Illumina sequencing; phylogenetic analysis;
D O I
10.1080/23802359.2019.1688114
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The first complete chloroplast genome (cpDNA) sequence of Pometia tomentosa was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,818 bp in length, contains a large single-copy region (LSC) of 85,666 bp and a small single-copy region (SSC) of 18,360 bp, which were separated by a pair of inverted repeat (IR) regions of 28,396 bp. The genome contains 133 genes, including 88 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 37.9%, and the corresponding values of the LSC, SSC, and IR regions are 36.2%, 31.9%, and 42.4%, respectively. Further phylogenomic analysis showed that P. tomentosa and Dimocarpus longan clustered in a clade in family Sapindaceae.
引用
收藏
页码:3950 / 3951
页数:2
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