A long-read draft assembly of the Chinese mantis (Mantodea: Mantidae: Tenodera sinensis) genome reveals patterns of ion channel gain and loss across Arthropoda

被引:1
|
作者
Goldberg, Jay K. [1 ,2 ]
Godfrey, R. Keating [3 ]
Barrett, Meghan [4 ,5 ]
机构
[1] Univ Arizona, Dept Ecol & Evolutionary Biol, 1041 E Lowell St, Tucson, AZ 85721 USA
[2] John Innes Ctr, Dept Crop Genet, Norwich Res Pk, Norwich NR4 7UH, Norfolk, England
[3] Florida Int Univ, Dept Biol Sci, 11200 SW 8th St, Miami, FL 33199 USA
[4] Indiana Univ Purdue Univ Indianapolis, Dept Biol, 420 Univ Blvd, Indianapolis, IN 46202 USA
[5] Indiana Univ Indianapolis, Dept Biol, 420 Univ Blvd, Indianapolis, IN 46204 USA
来源
G3-GENES GENOMES GENETICS | 2024年 / 14卷 / 06期
关键词
Chinese mantis; draft genome; nociception; ion channels; PREDATOR; CANNIBALISM; SENSOR; TRPA1;
D O I
10.1093/g3journal/jkae062
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Praying mantids (Mantodea: Mantidae) are iconic insects that have captivated biologists for decades, especially the species with cannibalistic copulatory behavior. This behavior has been cited as evidence that insects lack nociceptive capacities and cannot feel pain; however, this behaviorally driven hypothesis has never been rigorously tested at the genetic or functional level. To enable future studies of nociceptive capabilities in mantids, we sequenced and assembled a draft genome of the Chinese praying mantis (Tenodera sinensis) and identified multiple classes of nociceptive ion channels by comparison to orthologous gene families in Arthropoda. Our assembly-produced using PacBio HiFi reads-is fragmented (total size = 3.03 Gb; N50 = 1.8 Mb; 4,966 contigs), but is highly complete with respect to gene content (BUSCO complete = 98.7% [odb10_insecta]). The size of our assembly is substantially larger than that of most other insects, but is consistent with the size of other mantid genomes. We found that most families of nociceptive ion channels are present in the T. sinensis genome; that they are most closely related to those found in the damp-wood termite (Zootermopsis nevadensis); and that some families have expanded in T. sinensis while others have contracted relative to nearby lineages. Our findings suggest that mantids are likely to possess nociceptive capabilities and provide a foundation for future experimentation regarding ion channel functions and their consequences for insect behavior.
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页数:8
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